Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 5e-12 >seq13 Length=4293860 Score = 86.0 bits (94), Expect = 5e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTG 101094 ||||| ||| |||||||| || || || ||||| | || || | |||||||| || Sbjct 4012965 GTGCAGAGTAGATTCTTTCTGGATGTTATAATCTGACAAGGTACGGCCATCTTCCAGCTG 4013024 Query 101095 TTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTT 101154 ||| || ||| | || || ||||| |||||| ||| | ||||||||||| ||| || Sbjct 4013025 TTTTCCTGCAAAGATCAGTCTTTGCTGGTCTGGGGGAATACCTTCTTTGTCTTGAATCTT 4013084 Query 101155 TTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGT 101214 ||||||| | | || || | | | ||| | ||| || ||||| || || Sbjct 4013085 GGCCTTCACATTTTCAATGGTGTCACTTGGCTCCACTTCTAGGGTGATTGTTTTTCCAGT 4013144 Query 101215 CAATGTTTTAATAAAAATTTGCATT 101239 ||| ||||| | ||| ||||||||| Sbjct 4013145 CAAGGTTTTTACAAAGATTTGCATT 4013169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409535042839692