Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq1240 102 7e-17 >seq1240 Length=519700 Score = 102 bits (112), Expect = 7e-17 Identities = 116/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCT-CGAA 30075 ||||||||||| || || || || || ||||| |||||||| || |||| ||| | || Sbjct 50332 AAATGCCTCCATTGAAAACCATATACAGGTCCAAGGTCTCCTTCCTCCC-GTGATGTAAA 50390 Query 30076 GCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTC 30135 ||| ||| ||||| || |||||||| || || || |||||||| || ||||| || || Sbjct 50391 GCCTTGCTTATCCAAGAACTCTCTGGAGCCATTTGCATCCCAGATTTTCACCCCTTTTTC 50450 Query 30136 GGAGAGCTCTTTGGAGTTTGTGGACCCTCTGA 30167 || |||||||| | ||||| || || |||| Sbjct 50451 AGAAAGCTCTTTTGCATTTGTAGAACC-CTGA 50481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406038516528568