Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nanorana_20parkeri_20[refseq_20GCF_5F000935625.1_202015-03-17] 25,188 sequences; 2,053,867,363 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq16 105 6e-18 seq67 91.5 1e-13 >seq16 Length=4132212 Score = 105 bits (116), Expect = 6e-18 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||| ||| || || || || || || || | |||||||| | ||||||||| || Sbjct 2457842 TCGTCTCGGCTGATGAGCTCATTGGAGAAGGTGAGACCGGGCATCAGACCTCTCTTCTTC 2457901 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 | ||| || | ||| ||||| || ||||||||||| || |||||||| ||||||||||| Sbjct 2457902 AACCAGAAAACAGCAGCAAAGGAGCCAGAAAAGAAGATTCCTTCTACCGCGGCAAACGCC 2457961 Query 4692 ACTAATCG 4699 || | ||| Sbjct 2457962 ACCACTCG 2457969 >seq67 Length=2748889 Score = 91.5 bits (100), Expect = 1e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 4821 TAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAAT 4880 || ||||| || || ||||||||||| || | ||| || || ||||| ||||| ||||| Sbjct 1060567 TATGTGTCAATCAGAAGGCTATACATCTCCGGATGAATGTTCTCTATTGCAATTTGAAAG 1060626 Query 4881 CCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTT 4940 || || || || | |||||||| ||||| ||||| | || || | ||| || ||||| Sbjct 1060627 CCATAGAAACAGCACGCTTCTGTGACTTGTACTTCCTGACTGAAACGTTCAACCAAGTTC 1060686 Query 4941 TCGTTTAC 4948 | |||||| Sbjct 1060687 TTGTTTAC 1060694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426918504847604