Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq11 109 4e-19 >seq11 Length=155008753 Score = 109 bits (120), Expect = 4e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| || || || |||||||||||||| |||||||| |||||||||||||||| Sbjct 107960641 CTTTGTATTCAGCACCAAAGTGCCTCCACTGAAAACCATACACCGGTCCAAGATCTCCTT 107960700 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | |||||| | || || | || || |||||| | || ||||| |||||||||| Sbjct 107960701 CCTCTCTGGTTGAGAATCCTTGCTTGTCCAAAAATTCCCGGGAGCCATTTGCATCCCAAA 107960760 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | ||||| ||| || || ||||| Sbjct 107960761 TCTTTACGCCTTTTGCAGAAAGTTCTTT 107960788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 360775557817283