Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq11 118 9e-22 >seq11 Length=155008753 Score = 118 bits (130), Expect = 9e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 20994 CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 || ||||||||||| |||| || || || | |||||| || ||||||||||| || || Sbjct 107958869 CCAGTGACGTGAGCAATCATGTAAGTGAGTAAGGCGTAACTAGCGATGTTAAAGGGCACT 107958928 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACG 21113 || ||||||||||| | || ||||||||||||||||| || | ||| | | ||| Sbjct 107958929 CCCAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCACGATAACTCTTTGTCAACTACG 107958988 Query 21114 TAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 || ||||| || | | ||||||||| || |||||||| Sbjct 107958989 TAGAACTGGCAGAGAGTGTGACAAGGCGGCAGAGCCAT 107959026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427212767793840