Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 6e-11 >seq4 Length=159726490 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/218 (69%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| || || || || || || |||||||| | | ||| | || Sbjct 6847679 AGCACAAGATGCAGGGTTGATTCTTTCTGGATATTGTAGTCTGAAAGGGTGCGCCCATCT 6847620 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || | || ||| ||||| ||| | || |||||||| Sbjct 6847619 TCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCTTCTTTGTCT 6847560 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| || || | | | |||||| | ||||| || | ||| |||| Sbjct 6847559 TGGATCTTTGCT--TTGACATTCTCAATAGTGTCACTTGGCTCTACCTCTAGGGTAATGG 6847502 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 | || || ||||| ||||||||||| ||||||||| || Sbjct 6847501 TCTTGCCAGTCAGGGTTTTGACAAAGATCTGCATTGTG 6847464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404554639998670