Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq9 84.2 2e-11 >seq9 Length=159361991 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | ||| ||||||||||| ||||| ||||| |||||||| |||||| ||||| Sbjct 138039822 CCAGGCATCAGCCCTCGTTTCTTCAGCCAGAATATGGAAGCAAATGAACCAGAGAAAAAG 138039763 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCG 93247 || ||||| || || ||||| ||||||| || ||| Sbjct 138039762 ATCCCTTCAACAGCAGCAAAGGCCACAAGGCGCTCG 138039727 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGA 93652 || ||||| ||||||| || || ||||||||||| |||||||| | ||| ||||| ||| Sbjct 138025044 ACCTCTTCAGCAGTCCAGAATGAAGCTTCTGCTTTCTTGTACATTTGCCAGATGTCATGA 138024985 Query 93653 TATTGAATTGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTC 93705 || || || || || || ||||| | || || ||||| || || | ||||| Sbjct 138024984 TACTGGATGGGGAAGATCACAAATCTATGTGGATTATCCTTCAGAAGGGGCTC 138024932 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556108808214920