Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq11 105 6e-18 >seq11 Length=155008753 Score = 105 bits (116), Expect = 6e-18 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 ||||| || ||||||| ||| ||||| | | || || || || |||||||| || ||| Sbjct 107958869 CCAGTGACGTGAGCAATCATGTAAGTGAGTAAGGCGTAACTAGCGATGTTAAAGGGCACT 107958928 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| ||||||||||| || ||||| |||||||| || || | ||| |||| |||| Sbjct 107958929 CCCAGGCCCATGTCTCCTGATCTCTGGTACAGCTGGCACGATAACTCTTTGTCAACTACG 107958988 Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || || | |||||| ||||| || ||||| Sbjct 107958989 TAGAACTGGCAGAGAGTGTGACAAGGCGGCAGAGCCAT 107959026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440776764653720