Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_024303.1 Length=144898 Score E Sequences producing significant alignments: (Bits) Value seq67 86.0 6e-12 >seq67 Length=859205 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/144 (74%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 21124 TAGCATTTGGGGGCCTAGCTGCGATGGCTTAGATTGCATTGTTAAGCGGTGTGAACTGCC 21183 |||| ||||||| || | ||||||||||||||| |||| |||| | | ||||| Sbjct 207966 TAGCCTTTGGGGACCCACGTGCGATGGCTTAGATCAGATTGCAGAGCGCGTTCAGCTGCC 208025 Query 21184 AGAGCTTCAAGTGGGCGACTGGCTCATATTTGAAAACATGGGCGCTTACAGCTTGGTCAG 21243 |||||||| || ||||||||||| | ||||| || ||||| || |||| | | | ||| Sbjct 208026 TGAGCTTCATGTTGGCGACTGGCTTTTGTTTGAGAATATGGGTGCATACACCATAG-CAG 208084 Query 21244 C-TCTTCAACCTTTAACGGCTTCC 21266 | ||||| | || || || |||| Sbjct 208085 CATCTTCCAATTTCAATGGTTTCC 208108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462919622227440