Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq12 84.2 2e-11 seq11 82.4 8e-11 >seq12 Length=128359586 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 || ||||| ||| || |||||||| ||||||||||| || || ||| ||||||||||| Sbjct 109014909 GCATTTGC-TGCAGTAGAAGGAATATTCTTCTCTGGGTCCTTTGCTGCAATTTTCTGGCT 109014851 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 || || | || |||||||| || || | || |||||||||||||| Sbjct 109014850 AAAGAAAAGGGGTCTCATGCCTGGACTCACCTTTTCCAACGAGCTGAT 109014803 >seq11 Length=155008753 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || |||||||| || ||||||||||| || ||| ||||||||||| || || | || Sbjct 132627406 GTAGAAGGAATATTTTTCTCTGGCTCCTTTGCTGCAATTTTCTGGCTGAAGAAAAGGGGT 132627347 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 |||||||| || || | || |||||||||||||| Sbjct 132627346 CTCATGCCTGGACTCACCTTTTCCAACGAGCTGAT 132627312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547784065253520