Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20laevis_20[refseq_20GCF_5F001663975.1_202016-08-09] 108,033 sequences; 2,718,433,805 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq11 118 9e-22 >seq11 Length=155008753 Score = 118 bits (130), Expect = 9e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||| ||||| |||||||| ||||| | ||||||||||| ||||| || ||||| || | Sbjct 107958874 GACGTGAGCAATCATGTAAGTGAGTAAGGCGTAACTAGCGATGTTAAAGGGCACTCCCAG 107958933 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||||||||| |||| || || |||||||| || | ||| | | |||||||| Sbjct 107958934 GCCCATGTCTCCTGATCTCTGGTACAGCTGGCACGATAACTCTTTGTCAACTACGTAGAA 107958993 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAG 6773 |||||||| ||||| || || || || ||||| |||| Sbjct 107958994 CTGGCAGAGAGTGTGACAAGGCGGCAGAGCCATAAGAG 107959031 Score = 118 bits (130), Expect = 9e-22 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC 34631 |||| ||||| || || || || ||||| |||||||| |||||||| | | ||| Sbjct 107959031 CTCTTATGGCTCTGCCGCCTTGTCACACTCTCTGCCAGTTCTACGTAGTTGACAAAGAGT 107958972 Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691 | || |||||||| || || |||| ||||||||||| | || ||||| || ||||| | Sbjct 107958971 TATCGTGCCAGCTGTACCAGAGATCAGGAGACATGGGCCTGGGAGTGCCCTTTAACATCG 107958912 Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 |||||||||| | ||||| |||||||| ||||| ||| Sbjct 107958911 CTAGTTACGCCTTACTCACTTACATGATTGCTCACGTC 107958874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447657060851760