Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq5 96.9 4e-15 >seq5 Length=146437384 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||||||||| || || ||||| | || ||||| || ||||||| Sbjct 134155217 CTTCATCTCTGCTGATAAGTTCATTAGAGAAAGTGAGTCCAGGCATCAGCCCCCGTTTCT 134155158 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 | | ||||||||| | ||||||||| || || || || || || ||||||| ||||| | Sbjct 134155157 TCAGCCAGAATATGGAAGCAAATGAACCGGAGAAAAAGATCCCTTCAACAGCAGCAAAGG 134155098 Query 16344 C 16344 | Sbjct 134155097 C 134155097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511370789137040