Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq6 82.4 6e-11 >seq6 Length=135134832 Score = 82.4 bits (90), Expect = 6e-11 Identities = 116/162 (72%), Gaps = 6/162 (4%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAA---TTA 19028 |||| || || || |||||||| | || ||||| ||||| || || | || ||| Sbjct 93046102 ATGGCTCTGCCGCCTTGTCACACACTTTGCCAGTTCTACGT---AATCGATAAAGAGTTA 93046046 Query 19029 TCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCT 19088 ||||| || | |||||| | || ||||| |||||||| || || || ||||||||||| Sbjct 93046045 TCCTGTCAGCTGTACCAGCGGTCTGGGGACATGGGCCTGGGAGTGCCCTTCAACATTGCC 93045986 Query 19089 GGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGA 19130 | ||||| | || || || || | || ||||| || ||| Sbjct 93045985 AGTTATGCCTTGCTCACTTATATGATTGCTCATGTCACTGGA 93045944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399470783988990