Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq6 105 5e-18 >seq6 Length=135134832 Score = 105 bits (116), Expect = 5e-18 Identities = 112/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 102033 CTTTATATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTT 102092 |||| ||||| || || || |||||||||||||| |||||||| |||||||||||||||| Sbjct 93048235 CTTTGTATTCAGCACCAAAGTGCCTCCACTGAAAGCCATACACTGGTCCAAGATCTCCTT 93048294 Query 102093 CATCTCTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAA 102152 | ||||||| | || || | || || |||||| | || ||||| |||||||| | Sbjct 93048295 CCTCTCTGTTTGAGAATCCTTGCTTGTCCAAAAATTCCCGGGAGCCATTTGCATCCCAGA 93048354 Query 102153 TGTGCACGCCAGCTGCTGATAGCTCTTT 102180 | | || || ||| || || ||||| Sbjct 93048355 TCTTTACACCTTTTGCAGAAAGTTCTTT 93048382 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361221164446322