Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 7e-11 >seq1 Length=194866763 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || |||||||||||| | |||||||| |||||||| |||||| Sbjct 151538947 GATAAAGAAGGCATTCCTCCAGATCAACAAAGGTTGATCTTTGCTGGCAAACAGCTGGAA 151539006 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTA 29174 ||| | ||| | | || || || || || |||||||| ||||| || |||| | Sbjct 151539007 GATGGCCGAACCTTATCAGACTATAACATCCAAAAGGAATCCACTCTGCATTTGGTTCTC 151539066 Query 29175 CGATTACGAGGAGGG 29189 || || |||| ||| Sbjct 151539067 CGTTTGAGAGGTGGG 151539081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428300386806410