Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq6 118 1e-21 >seq6 Length=135134832 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 145753 CCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACC 145812 || |||| || || | ||| || || |||| || || ||||| |||||||||||||| Sbjct 93045945 CCAGTGACATGAGCAATCATATAAGTGAGCAAGGCATAACTGGCAATGTTGAAGGGCACT 93046004 Query 145813 CCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACG 145872 ||||| ||||||||||| || |||||||||||||| ||||| | ||| | ||| Sbjct 93046005 CCCAGGCCCATGTCCCCAGACCGCTGGTACAGCTGACAGGATAACTCTTTATCGATTACG 93046064 Query 145873 TAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 ||||||||||| || ||| || |||||||| ||||| Sbjct 93046065 TAGAACTGGCAAAGTGTGTGACAAGGCGGCAGAGCCAT 93046102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590026481200880