Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6 100 2e-16 >seq6 Length=135134832 Score = 100 bits (110), Expect = 2e-16 Identities = 119/159 (75%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 20994 CCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACC 21053 || ||||| ||||| |||| ||| || || | ||| || ||||| ||||| || || || Sbjct 93045945 CCAGTGACATGAGCAATCATATAAGTGAGCAAGGCATAACTGGCAATGTTGAAGGGCACT 93046004 Query 21054 CCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC-CCCCCGAGCCAC 21112 || ||||||||||| | |||| |||||||||||| ||||| | ||| ||| || Sbjct 93046005 CCCAGGCCCATGTCCCCAGACCGCTGGTACAGCTGACAGGATAACTCTTTATCGA-TTAC 93046063 Query 21113 GTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCAT 21151 ||| ||||| || | ||||||||| || |||||||| Sbjct 93046064 GTAGAACTGGCAAAGTGTGTGACAAGGCGGCAGAGCCAT 93046102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427740433366560