Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq5 87.8 1e-12 >seq5 Length=146437384 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||||||||| || | || || || |||||||| |||||||||||| Sbjct 134155095 TGGCCTTTGCTGCTGTTGAAGGGATCTTTTTCTCCGGTTCATTTGCTTCCATATTCTGGC 134155154 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 |||||||||| ||| ||||| || | | || || || || | || ||| | || | Sbjct 134155155 TGAAGAAACGGGGGCTGATGCCTGGACTCACTTTCTCTAATGAACTTATCAGCAGAGATG 134155214 Query 22868 AAG 22870 ||| Sbjct 134155215 AAG 134155217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356203981625266