Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-12 >seq1 Length=194866763 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/215 (70%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 42901 ACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCC 42960 |||||||| | |||| |||||||| | || || || || || || || | || ||| Sbjct 151539062 ACCAAATGCAGAGTGGATTCCTTTTGGATGTTATAGTCTGATAAGGTTCGGCCATCTTCC 151539003 Query 42961 AATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG 43020 | |||||||| ||||| ||||| | |||||||| | || | |||||||| || ||| Sbjct 151539002 AGCTGTTTGCCAGCAAAGATCAACCTTTGTTGATCTGGAGGAATGCCTTCTTTATC-CTG 151538944 Query 43021 -ATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTT 43079 || | || || | ||| ||||| | | ||| || |||| || || || || Sbjct 151538943 TATTTTAGCCTTCACATTTTCAATAGTGTCACTTGGCTCAACTTCTAGTGTGATGGTCTT 151538884 Query 43080 TCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCT 43114 || || || ||||||||||| || ||||| |||| Sbjct 151538883 CCCAGTGAGCGTTTTCACAAATATCTGCATGTTCT 151538849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381337891739676