Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 >seq2 Length=170201513 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||| || ||||| ||||||||||| | | ||| | | || Sbjct 31611803 AGGACAAGATGCAGGGTGGATTCTTTTTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCT 31611744 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || | || ||| ||||| ||| | || |||||||| Sbjct 31611743 TCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCTTCTTTGTCT 31611684 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| || || | | | ||||| | ||||| |||| |||||||| Sbjct 31611683 TGGATCTTTGCT--TTGACATTCTCTATTGTGTCACTTGGCTCTACCTCCAAGGTGATGG 31611626 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || ||||| ||||| ||||| ||||||||| Sbjct 31611625 TCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATT 31611591 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || || | |||||| ||||| || || || ||||||||||| | | ||| | | || Sbjct 31611347 AGGACAAGATGCAGGGTGGATTCTTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCT 31611288 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || | || ||| ||||| ||| | || |||||||| Sbjct 31611287 TCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGGTCTGGAGGGATACCTTCTTTGTCT 31611228 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || |||||| || || | | | ||||| | ||||| |||| |||||||| Sbjct 31611227 TGGATCTTTGCT--TTGACATTCTCTATTGTGTCACTTGGCTCTACCTCCAGGGTGATGG 31611170 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 | || || ||||| ||||| ||||| ||||||||| Sbjct 31611169 TCTTGCCAGTCAGGGTTTTTACAAAGATCTGCATT 31611135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405054319717780