Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=135134832 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 ||||| |||||||||| ||||||||| | | || ||| ||||||||||| || || ||| Sbjct 93045945 CCAGTGACATGAGCAATCATATAAGTGAGCAAGGCATAACTGGCAATGTTGAAGGGCACT 93046004 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 |||| |||||||| || |||| ||| |||||||||||||| | ||| || ||| Sbjct 93046005 CCCAGGCCCATGTCCCCAGACCGCTGGTACAGCTGACAGGATAACTCTTTATCGATTACG 93046064 Query 20360 TAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCAT 20397 || || || || | |||||| ||||| || ||||| Sbjct 93046065 TAGAACTGGCAAAGTGTGTGACAAGGCGGCAGAGCCAT 93046102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441335161934480