Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq5 93.3 8e-14 >seq5 Length=146437384 Score = 93.3 bits (102), Expect = 8e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 |||||||| | || |||||||||||||| || || ||||||||| |||||| ||||| Sbjct 134155082 GGCGAGCGCATTGTGGCCTTTGCTGCTGTTGAAGGGATCTTTTTCTCCGGTTCATTTGCT 134155141 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCT 25991 |||| |||||||| ||| | |||| ||||| || || ||||| || || || || Sbjct 134155142 TCCATATTCTGGCTGAAGAAACGGGGGCTGATGCCTGGACT-CACTTTCTCTAATGAACT 134155200 Query 25992 CATCAGCAGGGACGA 26006 |||||||| || || Sbjct 134155201 TATCAGCAGAGATGA 134155215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928765592759680