Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq106 86.0 7e-12 >seq106 Length=555726 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| | || ||| | | || |||||||||||||| || || || ||||| ||||||||| Sbjct 346712 TGGTACGCCATTATAGAGTCGCAGACGGAGACTGGCACTCCCTACATGCTGTACAAGGAT 346771 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || |||||| ||||| || || |||| |||| || || ||| || || || ||| Sbjct 346772 GCCTGTAACCGCAAGAGCAATCAGCAGAACCTGGGCACCATTAAGTGCAGTAACCTGTGC 346831 Query 75998 ACGGAAATTTTAGAGTACAC 76017 || || || | |||||||| Sbjct 346832 ACAGAGATCGTGGAGTACAC 346851 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596518727527360