Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 4e-13 >seq1 Length=194866763 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| |||||||| || || | || || || ||||||||| | || ||||| Sbjct 151539082 ATGCAGATATTTGTGAAGACCCTGACTGGGAAGACCATTACCCTTGAGGTTGAGCCAAGT 151539141 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | ||||| || || ||||| |||||| | ||| || || Sbjct 151539142 GATACTATTGAGAATGTAAAGGCAAAAATCCAAGACAAGGAAGGCATTCCCCCTGACCAG 151539201 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | |||| ||| || || |||||||| |||| | || | | || |||||| Sbjct 151539202 CAGAGATTGATTTTTGCTGGCAAGCAGCTGGAAGATGGTCGCACTCTTTCTGACTACAAC 151539261 Query 110453 ATTCAAAAAGAATCTACGTTGCAC 110476 |||||||||||||| || |||||| Sbjct 151539262 ATTCAAAAAGAATCCACCTTGCAC 151539285 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||||||||| || || | || || ||||| || ||| | || || || Sbjct 151539310 ATGCAAATATTTGTGAAGACCCTGACTGGTAAAACAATAACCCTTGAGGTTGAACCAAGT 151539369 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | |||||| || ||| ||||||||||| | || || || Sbjct 151539370 GACACCATTGAAAATGTAAAAGCAAAAATTCAAGACAAAGAAGGTATTCCTCCCGACCAG 151539429 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | || | ||| || || |||||||| |||| | | ||| | | ||||||||| Sbjct 151539430 CAGAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACACTCTCTGATTACAAC 151539489 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| |||||||| || ||||| |||| Sbjct 151539490 ATTCAGAAAGAATCCACACTGCACTTGGT 151539518 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412807275059246