Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1 102 2e-16 >seq1 Length=194866763 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || |||||| || || || || || ||||| || || | || || ||| |||| Sbjct 151539313 CAAATATTTGTGAAGACCCTGACTGGTAAAACAATAACCCTTGAGGTTGAACCAAGTGAC 151539372 Query 206233 ACAGTCGAATCAGTAAA-GCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| ||||| |||||| |||||||| |||||||| ||| || ||| || Sbjct 151539373 ACCATTGAAAATGTAAAAGCAAAA-ATTCAAGACAAAGAAGGTATTCCTCCCGACCAGCA 151539431 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 ||| | ||||| |||||||||||| |||||||||| | || | | ||||||||| | Sbjct 151539432 GAGATTGATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGCACACTCTCTGATTACAACAT 151539491 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTT 206379 |||||||| || || || ||| | ||| Sbjct 151539492 TCAGAAAGAATCCACACTGCACTTGGTT 151539519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181717500737062