Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 7e-12 >seq6 Length=135134832 Score = 86.0 bits (94), Expect = 7e-12 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || |||||||| ||||||||||| || || ||||||||||||||| || || | || Sbjct 118784091 GTAGAAGGAATATTCTTCTCTGGATCCTTTGCTGCTATTTTCTGGCTAAAGAAAAGGGGA 118784150 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 |||||||| || || | |||||||| |||||||| Sbjct 118784151 CTCATGCCTGGACTCACCTTCTCCAATGAGCTGAT 118784185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548478024547680