Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq6 114 1e-20 >seq6 Length=135134832 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||||||||| ||||| || ||||||| || ||||| ||||||||||| ||||| || | Sbjct 93045950 GACATGAGCAATCATATAAGTGAGCAAGGCATAACTGGCAATGTTGAAGGGCACTCCCAG 93046009 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 |||||||| || || || || || ||||| ||||| | ||| || |||||||| Sbjct 93046010 GCCCATGTCCCCAGACCGCTGGTACAGCTGACAGGATAACTCTTTATCGATTACGTAGAA 93046069 Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAG 6773 ||||| || ||||| || || || || ||||| |||| Sbjct 93046070 CTGGCAAAGTGTGTGACAAGGCGGCAGAGCCATAAGAG 93046107 Score = 114 bits (126), Expect = 1e-20 Identities = 120/158 (76%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC 34631 |||| ||||| || || || || ||||| || ||||| |||||||| || ||| Sbjct 93046107 CTCTTATGGCTCTGCCGCCTTGTCACACACTTTGCCAGTTCTACGTAATCGATAAAGAGT 93046048 Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691 | ||||| ||||| || || || || || |||||||| | || ||||| |||||||||| Sbjct 93046047 TATCCTGTCAGCTGTACCAGCGGTCTGGGGACATGGGCCTGGGAGTGCCCTTCAACATTG 93045988 Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 | ||||| || ||||||| || ||||| ||||||||| Sbjct 93045987 CCAGTTATGCCTTGCTCACTTATATGATTGCTCATGTC 93045950 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448224174423840