Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13]
6,822 sequences; 1,440,398,454 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq6 114 1e-20
>seq6
Length=135134832
Score = 114 bits (126), Expect = 1e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Plus
Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675
||||||||| ||||| || ||||||| || ||||| ||||||||||| ||||| || |
Sbjct 93045950 GACATGAGCAATCATATAAGTGAGCAAGGCATAACTGGCAATGTTGAAGGGCACTCCCAG 93046009
Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735
|||||||| || || || || || ||||| ||||| | ||| || ||||||||
Sbjct 93046010 GCCCATGTCCCCAGACCGCTGGTACAGCTGACAGGATAACTCTTTATCGATTACGTAGAA 93046069
Query 6736 TTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAG 6773
||||| || ||||| || || || || ||||| ||||
Sbjct 93046070 CTGGCAAAGTGTGTGACAAGGCGGCAGAGCCATAAGAG 93046107
Score = 114 bits (126), Expect = 1e-20
Identities = 120/158 (76%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 34572 CTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGC 34631
|||| ||||| || || || || ||||| || ||||| |||||||| || |||
Sbjct 93046107 CTCTTATGGCTCTGCCGCCTTGTCACACACTTTGCCAGTTCTACGTAATCGATAAAGAGT 93046048
Query 34632 TGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTG 34691
| ||||| ||||| || || || || || |||||||| | || ||||| ||||||||||
Sbjct 93046047 TATCCTGTCAGCTGTACCAGCGGTCTGGGGACATGGGCCTGGGAGTGCCCTTCAACATTG 93045988
Query 34692 CTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729
| ||||| || ||||||| || ||||| |||||||||
Sbjct 93045987 CCAGTTATGCCTTGCTCACTTATATGATTGCTCATGTC 93045950
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448224174423840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |