Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq6 102 7e-17 >seq6 Length=135134832 Score = 102 bits (112), Expect = 7e-17 Identities = 107/141 (76%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 3244 AGTTGTTGATGAGCTCTTCCGAGATGGGGTAAACTGGGGGCGCATTGTTGCTTTCTTTGA 3303 ||| || || |||||||| | |||||||| |||||||| | ||||||||||| || || Sbjct 52587054 AGTAGTGGAGGAGCTCTTTCATGATGGGGTCAACTGGGGAAGGATTGTTGCTTTTTTCGA 52587113 Query 3304 GTTTGGTGGTGTTATGTGTGTGGAAAGCGTCAATAGAGGCATACCCTCCCTCGTTGACAA 3363 ||||||||| || ||||| |||||||| || ||| ||| || | | || || || Sbjct 52587114 GTTTGGTGGGGTCATGTGCGTGGAAAGTGTTAATCGAGAAATGTCTCCTCTGGTGGATTC 52587173 Query 3364 CATTGCCGCGTGGATGACAGA 3384 ||||| | ||||||||||| Sbjct 52587174 CATTGTGGGTTGGATGACAGA 52587194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414442339103608