Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 5e-12 >seq2 Length=170201513 Score = 86.0 bits (94), Expect = 5e-12 Identities = 143/207 (69%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 |||| |||||| |||||||| ||||||||||| || | | | | ||||||| | || Sbjct 31802676 TGCAGAGTTGACTCTTTTTGTATATTGTAATCAGCAAGACTACGGCAATCTTCAAGCTGC 31802617 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 ||||| ||| | || | ||| || |||||| ||| | ||||||||||| || ||| Sbjct 31802616 TTGCCGGCAAAGATCAACCTCTGCTGGTCTGGGGGGATACCTTCTTTGTCTTGGATCTTT 31802557 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTC 101215 ||| |||| | | || || | | | | || | ||| || || ||||| ||| Sbjct 31802556 GCTTTGACATTCTCTATTGTGTCACTTGGCTCTACCTCCAGGGTGATGGTCTTGCCAGTC 31802497 Query 101216 AATGTTTTAATAAAAATTTGCATTATT 101242 | ||||| | ||| || ||||| ||| Sbjct 31802496 AGGGTTTTTACAAAGATCTGCATGATT 31802470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409626739520898