Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Xenopus_20tropicalis_20[refseq_20GCF_5F000004195.3_202016-07-13] 6,822 sequences; 1,440,398,454 total letters Query= NC_031224.1 Length=59443 Score E Sequences producing significant alignments: (Bits) Value seq6 86.0 2e-12 >seq6 Length=135134832 Score = 86.0 bits (94), Expect = 2e-12 Identities = 111/152 (73%), Gaps = 6/152 (4%) Strand=Plus/Minus Query 52109 TATGGCGTTGGCTCCCTGCCATACACTATTCCAATTCTATGTA---GCTGAAGGTAAGCT 52165 |||||| || | || || || ||||| | ||| ||||| ||| | | ||| || | Sbjct 93046103 TATGGCTCTGCCGCCTTGTCACACACTTTGCCAGTTCTACGTAATCGATAAAG---AGTT 93046047 Query 52166 TTCGTGCCATTTGTATCAGCGGTCTGCCGACATGTTCTTGGGCGTTCCGTTTAACATTGC 52225 || || || |||| |||||||||| |||||| | |||| || || || |||||||| Sbjct 93046046 ATCCTGTCAGCTGTACCAGCGGTCTGGGGACATGGGCCTGGGAGTGCCCTTCAACATTGC 93045987 Query 52226 CAGCTATTCCTTGCTGACGCATCTGATTGCTC 52257 ||| ||| ||||||| || || ||||||||| Sbjct 93045986 CAGTTATGCCTTGCTCACTTATATGATTGCTC 93045955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190080600085420