Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq281 82.4 7e-11 >seq281 Length=3633602 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 28961 AATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGC 29020 |||||| || || | ||||| | ||||| ||||| |||||| || || ||| Sbjct 126707 AATGCAGATCTTTGTGAAAACTCTCACGGGTAAAACTATTACCCTTGAGGTTGAGCCCAG 126648 Query 29021 AGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCA 29080 || || | | || | ||| ||| || || |||||||| | ||| || || Sbjct 126647 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 126588 Query 29081 ACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAA 29140 || ||| | |||||||| || ||||||||||||||| | ||| || | |||||||| Sbjct 126587 GCAGAGATTGATCTTTGCTGGGAAACAACTGGAAGATGGCCGTACTCTGTCTGATTACAA 126528 Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGT 29170 || ||||| ||||| || || ||| |||| Sbjct 126527 CATCCAGAAAGAATCCACCCTGCACCTGGT 126498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428228982927500