Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq233 100 5e-16 >seq233 Length=5064115 Score = 100 bits (110), Expect = 5e-16 Identities = 103/132 (78%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||||| ||||| ||||| ||||| |||||||| | || |||| Sbjct 4633666 GCATTTTTTGGAGCCCAGCTGAATTCCTTTATTCATGTGATTATGTATTCATACTATGCA 4633725 Query 52117 ATGGCCGCTTGTGG-TCCTATGTTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTAT 52175 || | ||| ||| ||| ||||| |||||||| ||||||||||| ||||| || || Sbjct 4633726 CTGTCTGCTCTTGGCCCCTGGATTCAG-AAGTATCTCTGGTGGAAACGCTATCTGACCAT 4633784 Query 52176 AATGCAGTTGGT 52187 ||||| |||| Sbjct 4633785 GTTGCAGCTGGT 4633796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922960230820000