Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_003027.1
Length=150773
Score E
Sequences producing significant alignments: (Bits) Value
seq260 277 2e-69
seq205 259 5e-64
seq3 259 5e-64
seq1663 239 4e-58
seq4595 235 5e-57
seq50 185 8e-42
seq131 109 5e-19
seq58 109 5e-19
seq201 107 2e-18
seq27 100 3e-16
seq1 91.5 1e-13
>seq260
Length=4071714
Score = 277 bits (306), Expect = 2e-69
Identities = 626/931 (67%), Gaps = 35/931 (4%)
Strand=Plus/Minus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || ||||| || |||||| | ||||| || |||||||||||||| || |||
Sbjct 1910055 GACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 1909996
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAA 14017
|||||||| ||||| ||||| || |||||||||||| | | |||| |||| | ||
Sbjct 1909995 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 1909936
Query 14018 CCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAA 14077
|| | ||| | | || ||| |||| || || |||||| |||
Sbjct 1909935 CCCAATTCCAGCATTAGTCTG-----AATGTACCGCTTA---------ATTAAAGTGCAA 1909890
Query 14078 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 14137
|| || | || || || ||||| | | | || | || || | |||||| |||
Sbjct 1909889 TTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACA 1909830
Query 14138 GCCTCGTTTATAATAATCGTAATAATT---TCATTAGAAGGAGGATATTTTAGATGTTTA 14194
| | | |||| || | ||| | | | ||||| | | |||| |||
Sbjct 1909829 GAAT---TAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTG 1909773
Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254
|| |||| ||| ||| | |||| || | ||||||||||| ||||||||||| || | |
Sbjct 1909772 AACATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGA 1909713
Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAA-CCAAAATATTGCAGCGAATGATCC 14313
||||| | || ||||| | |||||| |||||| | ||| |||||| || || || |
Sbjct 1909712 AATGTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACT 1909653
Query 14314 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14373
|||||||| ||||| || | ||| ||||| |||| | || || || | ||||
Sbjct 1909652 AGAAAAGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTC 1909593
Query 14374 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14433
||||| | ||||| ||||| || | || || |||| | || || ||| |
Sbjct 1909592 TTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCC 1909533
Query 14434 AATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14493
||| |||||||| | | |||| | | |||| | | |||||| || |||||||| |
Sbjct 1909532 AATGGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAG 1909473
Query 14494 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGC 14553
|||||||||||||| ||||||||||| || | || || || ||||| ||||| | ||
Sbjct 1909472 ACTATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGC 1909413
Query 14554 TTCTG-ACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612
||||| | || || || ||| | ||||| || |||| |||||||| ||||| ||||
Sbjct 1909412 TTCTGTAACA-TGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCAT 1909354
Query 14613 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCA--TTGCTGAG 14670
|| | |||||||| ||||||| || || | || |||| | || ||| | | | |
Sbjct 1909353 CATTTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCCGGG 1909294
Query 14671 TTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTA 14728
|| | || | ||| || |||||||||||||| || || || || || ||||| |
Sbjct 1909293 CTTCT--CAGT--GCTGAATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAA 1909238
Query 14729 GCAACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAAT 14788
|| ||||||| || ||||| | || || | ||| |||||||| | |||||
Sbjct 1909237 GCCTCAGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAAGAAGACAAAG 1909178
Query 14789 CTTGAAGATG--TTTCTTTAAGAATTGGTTC 14817
| ||||| | ||||| | || | ||||||
Sbjct 1909177 C--GAAGAGGATTTTCTCTCAGCAATGGTTC 1909149
>seq205
Length=6054944
Score = 259 bits (286), Expect = 5e-64
Identities = 501/738 (68%), Gaps = 21/738 (3%)
Strand=Plus/Plus
Query 13901 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13960
|| || |||||| | ||||||||||| ||||| || ||| |||||||| | || ||||||
Sbjct 2460976 ATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTCC 2461035
Query 13961 AGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCT 14020
||||| ||||| ||||| || ||||||||| || | | ||||| | | | ||||
Sbjct 2461036 AGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCC 2461095
Query 14021 AGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTC 14080
||||| | | || ||| || || |||| ||||| || | ||||||| ||||||
Sbjct 2461096 AGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTC 2461155
Query 14081 ATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCC 14140
|| || || || || ||||| | | || | || || | |||||| |||||
Sbjct 2461156 ATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCA 2461215
Query 14141 TCGTTTATAATAATCGTAATAATTTCATTAGAAGG-----AGGATATTTTAGA---TGTT 14192
| ||||||| || | ||| | | | ||| | || |||| ||||
Sbjct 2461216 T------TAATAAT--TATTTCTTTTACTCTCTGCTCTTAAGGTTTTTGTAGAAGGTGTT 2461267
Query 14193 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 14252
| || ||| || ||||| ||||| || | ||||||||||| || | |||||| || |
Sbjct 2461268 TGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGG 2461327
Query 14253 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 14312
||||||| | || ||| || | | || || | ||| || |||| | || ||
Sbjct 2461328 AAAATGTCAGACCAGGCTTC-----TTGCTTCTTGAGCCAGAACATTGATACAAAAGAAT 2461382
Query 14313 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT 14372
| |||||||| | ||| || |||| ||||| |||| | | |||||| | | ||||
Sbjct 2461383 CAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTT 2461442
Query 14373 TTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 14432
||||| | ||||| | ||||| || | || || || ||| || || ||||
Sbjct 2461443 CTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTT 2461502
Query 14433 CAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 14492
|||| ||||||| ||| |||| | || |||| | | | |||| || ||||||| |
Sbjct 2461503 CAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGA 2461562
Query 14493 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAG 14552
|||||||||||||| || ||| ||||||| || || || || ||||| ||||| |
Sbjct 2461563 GACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGA 2461622
Query 14553 CTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14612
|||||| || || | | | |||| || |||| |||||||| ||||| ||||
Sbjct 2461623 CTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCAT 2461682
Query 14613 CACTAGCTGCAAAAAATG 14630
|||| |||||||| ||||
Sbjct 2461683 CACTTGCTGCAAAGAATG 2461700
>seq3
Length=52730029
Score = 259 bits (286), Expect = 5e-64
Identities = 459/664 (69%), Gaps = 8/664 (1%)
Strand=Plus/Plus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || ||||| || |||||||| | |||||||| ||| |||||||||| | |||
Sbjct 13968560 GACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCT 13968619
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAA 14017
|||||||| |||| ||||| || |||||||||||| | | |||| |||| | ||
Sbjct 13968620 TCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 13968679
Query 14018 CCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAA 14077
|| ||||| | | | ||| || || | || ||||| || ||||||| |||
Sbjct 13968680 CCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAA 13968739
Query 14078 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 14137
||||| || || | ||| ||||| | | || | ||| || | ||||| |||
Sbjct 13968740 TTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACA 13968799
Query 14138 GCCTCGTTTATAATAATCG-TAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTTA 14194
|| | | ||||| || | || | || | ||||| | | || |||||
Sbjct 13968800 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 13968856
Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254
|| |||| || ||||| ||||| || | ||||||||||| |||||||| || || |||
Sbjct 13968857 AACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAA 13968916
Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314
||||| | || ||||| ||||| || || | ||| ||||||| || ||||| ||
Sbjct 13968917 AATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCA 13968976
Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374
||| |||| |||| || ||||| ||||| ||| | || || ||| | | |||| |
Sbjct 13968977 GAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCT 13969036
Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434
|||| | |||| ||||| || | ||| | || | | || ||| |||||
Sbjct 13969037 TTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCA 13969096
Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494
|| |||||||| | | |||| | || |||| |||| |||||| || |||||||| |
Sbjct 13969097 ATGGCATTAAAGAGAAATTCCCTGTCCTTAG-ACTT-TAATGTAAGTGTCAATAAGGAGA 13969154
Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554
|||||||||||||| |||||||||||||| || || || || ||||| ||||| |||
Sbjct 13969155 CTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACAGTGGGCT 13969214
Query 14555 TCTG 14558
||||
Sbjct 13969215 TCTG 13969218
>seq1663
Length=17039
Score = 239 bits (264), Expect = 4e-58
Identities = 500/742 (67%), Gaps = 21/742 (3%)
Strand=Plus/Minus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || |||||||| |||||||| | ||| | ||| |||||||||| || |||
Sbjct 3198 GACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCT 3139
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAA 14017
| |||||| | ||| ||||| || |||||||||||| | |||||| |||| | ||
Sbjct 3138 TTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAA 3079
Query 14018 CCTAGTTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAA 14077
|| ||||| | | || ||| || || | ||| ||||| || | ||||||| |||
Sbjct 3078 CCCAGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAA 3019
Query 14078 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 14137
||||| || || | || ||||| | | | | || |||| || |||| |||
Sbjct 3018 TTCATTCCGATATGCTTCACAGGCAAGGCCTCGTAAAGAACTTCTGTT-CTATCCCAACA 2960
Query 14138 GCCTCGTTTATAATAATCG-TAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTTA 14194
|| | | ||||| || | || | || | ||||| | | || |||||
Sbjct 2959 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 2903
Query 14195 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 14254
|| ||| ||| ||||| ||||| || | ||||||||||| ||||||||||| || |||
Sbjct 2902 AACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 2843
Query 14255 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 14314
||||| | || ||||| | |||| | || | | ||| | || || || || || ||
Sbjct 2842 AATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCA 2783
Query 14315 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14374
||||||| ||||| || ||||| ||||| | | || | | |||| |
Sbjct 2782 GAAAAGACGATTCCTTCCACTGCTGCAAAGG-------------TACATAGGTAGCTTCT 2736
Query 14375 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14434
|||| | || || ||||| || | || || || | | || || ||| |
Sbjct 2735 TTGTCCCTAATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAA 2676
Query 14435 ATAGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14494
|| |||||||| | | |||| | || |||| | | |||||| || |||||||| |
Sbjct 2675 ATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGA 2616
Query 14495 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCT 14554
|||||||||||||| |||||||||||||| || || || || ||||| ||||| | | |
Sbjct 2615 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGT 2557
Query 14555 TCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14614
|||| ||| || | | | ||||| || |||| |||||||| ||||| |||||
Sbjct 2556 TCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCA 2497
Query 14615 CTAGCTGCAAAAAATGCCAATA 14636
|| || || || || |||| ||
Sbjct 2496 CTTGCCGCTAAGAACGCCAGTA 2475
>seq4595
Length=7281
Score = 235 bits (260), Expect = 5e-57
Identities = 618/919 (67%), Gaps = 37/919 (4%)
Strand=Plus/Minus
Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975
||||||| | | ||| || |||||| ||| | ||||| |||| ||||| |||
Sbjct 6890 TGATATTTGCCTATTCTGTTCTCAAAGTAGTC-----TCCCTTCTTGTGAAATATTCTCC 6836
Query 13976 ATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAAT 14035
|| || |||||| ||||| | | ||||| |||| | |||| ||||| | | || |
Sbjct 6835 ATGAAGTCAAATAGATTTTCTACTTTGAACACCTTATTAAAACCCAGTTCCAGCATTAGT 6776
Query 14036 CTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTT 14095
|||| || ||||| |||||||| | ||||||| ||||||| || || || ||
Sbjct 6775 CTATTTGCCATGAATTCAATATACCGCTTCATTAAAGTGCAATTCACTCCGATAAGCTTC 6716
Query 14096 ACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATC 14155
||||| | | || | || || | |||||| | || | | | ||| ||
Sbjct 6715 ACAGGCACGGCCTCAGTGAGGAACTCCTGTTCTATCCTAATAGTAT---TAACAATTATT 6659
Query 14156 G-TAATAATTTCA-TTAGAAGGAGGATATTTTAGA---TGTTTAAAAATTAAACACGCAA 14210
| || | || || || ||| | | ||| ||||| || | || || ||||
Sbjct 6658 TCTTTTACTCTCTGTTCCAA--AGGTTTGTGTAGCAGGTGTTTGAACACTAGGCAAGCAA 6601
Query 14211 AATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG-AAAATGTTAATCCTGGC 14269
||||| || | |||||| |||| ||||||||||| |||| ||||||| | || |||
Sbjct 6600 TGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCATTTGGAAAATGTCAGACCAGGC 6541
Query 14270 ATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCC 14329
|| | | ||| ||| || | ||| ||||||| || || || || |||||||| |||||
Sbjct 6540 ATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCT 6481
Query 14330 TCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCA 14388
|| ||||| ||||| |||| | | || ||| | | || ||||| || | |||||
Sbjct 6480 TCCACTGCTGCAAAGGCTACAACACACTCCCCATAGGTAATTTCTTTGTCTCCA-ATCCA 6422
Query 14389 TTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATA 14447
| || |||| || | || || || | | || ||| ||||||| |||||||| |
Sbjct 6421 GCG-CAAGACCCAATCTGCCTTCTTCTTCACACAAGGCATCATTTCAATGGCATTAAAGA 6363
Query 14448 AATGTTCCTTCTCTTTAGTA-CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCA 14506
| |||| | || |||| | ||| || | || |||||||| | ||||||||||||
Sbjct 6362 GAAATTCCCTTTCCTTAGAATCTTTCAAATCA-GTGTCAATAAGGAGACTATACATTTCA 6304
Query 14507 GAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGT 14566
|| |||||||||||||| | || || || ||||| ||||| || ||||||| |||
Sbjct 6303 GAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAACAGCTGGCTTCTGTAATTTGA 6244
Query 14567 ACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAA 14626
|| ||| | |||| || | || |||| ||| ||||| |||||||| ||||| ||
Sbjct 6243 ACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACTATGCCATCACTTGCTGC-AAG 6185
Query 14627 AATGCCA----ATATGTTTTTAATAAAGTATTGCTCTTCATTGCT-GAGTTTTTTCCAAT 14681
||||||| | |||| | | |||||| || ||| ||| || ||| ||| |
Sbjct 6184 AATGCCACAGTACATGTGAT--GTGAAGTATCTCTTCTCA-GGCTCCAGGGTTTCCCAGT 6128
Query 14682 CGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTT 14739
||| || ||| || ||||||| || | ||| | ||||||| ||| |||||||
Sbjct 6127 --GCTGAATGTCCGTAAAAAGATCCACCTTCTCAGCGATCCAAAAGGAAGCCTCAGCTTT 6070
Query 14740 TTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TTGAAGATG 14798
|| ||||| ||| || || | ||| ||| |||| | ||||| | || |||
Sbjct 6069 CTTGTACATCTGCCAAATATCATGGTATTCAATAAGAAAGATGACAAAGCACCGAGGAT- 6011
Query 14799 TTTCTTTAAGAATTGGTTC 14817
||||| | || | ||||||
Sbjct 6010 TTTCTCTCAGCAATGGTTC 5992
>seq50
Length=19932738
Score = 185 bits (204), Expect = 8e-42
Identities = 564/862 (65%), Gaps = 41/862 (5%)
Strand=Plus/Minus
Query 13904 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAA-GTTAGTTTTACCTTCCAG 13962
|| |||||| | ||| |||| | ||| || ||||| || |||||| || ||||||||
Sbjct 2663292 ACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAG 2663233
Query 13963 TGATATATTTTCCATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAG 14022
||| ||||| ||||| || |||||||||||| | | || || || | | |||| ||
Sbjct 2663232 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAG 2663173
Query 14023 TTCTAATAGTAATCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCAT 14082
||| | | || ||| || || | ||| ||||| || | ||||||| ||||||||
Sbjct 2663172 TTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCAT 2663113
Query 14083 ACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTC 14142
|| || || || ||||| | | | || | || | | |||||| ||||| |
Sbjct 2663112 TCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT- 2663054
Query 14143 GTTTATAATAATCGTAATAATT---TCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 14199
| | ||| || ||| | | | |||| | | || ||||| ||||
Sbjct 2663053 --TAACAATTATTTCTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAG 2662996
Query 14200 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 14259
|||||||| |||||||||| ||||||| ||| || ||||||||
Sbjct 2662995 G---CACGCAAAG-------------CCTCATCTCTGCTAATAATTTCATTGGAAAATGT 2662952
Query 14260 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC-CGGAAA 14318
| || ||||| | |||| || || | | || |||| || || | | ||||
Sbjct 2662951 GAGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAA 2662892
Query 14319 AGAATATTCCCTCAACTGCA--GCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14376
|||| | ||| || |||| ||||| || | | || || | | ||||| |||
Sbjct 2662891 AGAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTT 2662832
Query 14377 GTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAAT 14436
|| | |||| ||||| || ||||| || || | | || ||||||||||||
Sbjct 2662831 GTCCCTAGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAAT 2662772
Query 14437 AGCATTAAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 14496
|| | || | | ||| | || ||| | | ||| || || |||||||| | ||
Sbjct 2662771 GCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACT 2662712
Query 14497 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14556
|||||||| ||| |||||| |||||| || || || || |||| ||||| | |||||
Sbjct 2662711 ATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTC 2662652
Query 14557 TGACCAT-TGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14615
| | || || || || | ||||| || |||| |||||||| ||||| |||||||
Sbjct 2662651 T-ATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCAC 2662593
Query 14616 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCA--TTGCTGAGTTT 14673
| |||||||| ||||||| || | | ||| | | || ||| ||| || | ||| |
Sbjct 2662592 TTGCTGCAAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAG--T 2662535
Query 14674 TTTCCAATCGGCTAAA--TCCTTAGAAAGA-----TCTACTTCATCAACTGTCCAAAAAC 14726
|| ||| | ||| || ||||||| |||| || || || ||| ||||||||||
Sbjct 2662534 TTCCCAGT--GCTGAATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGG 2662477
Query 14727 TAGCAACAGCTTTTTTATACAT 14748
||| |||||| || |||||
Sbjct 2662476 AAGCCTGAGCTTTCTTGTACAT 2662455
>seq131
Length=9795181
Score = 109 bits (120), Expect = 5e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611
Query 14346 CTA 14348
|||
Sbjct 9778612 CTA 9778614
Score = 96.9 bits (106), Expect = 3e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || ||||| | |||||||| | ||||| || |||||||||||||| || |||
Sbjct 9777471 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 9777530
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993
|||||||| ||||| ||||| || ||||||||||||
Sbjct 9777531 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 9777566
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532
|||||| || |||||||| | |||||||||||||| |||||||||||||| || || ||
Sbjct 9781141 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 9781200
Query 14533 AAAACCATAAAAACATCTAGCTTCTG 14558
|| ||||| ||||| | |||||||
Sbjct 9781201 GAAGCCATAGAAACAGCGGGCTTCTG 9781226
>seq58
Length=18876681
Score = 109 bits (120), Expect = 5e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634
Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345
| | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574
Query 14346 CTA 14348
|||
Sbjct 18847573 CTA 18847571
Score = 96.9 bits (106), Expect = 3e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13898 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13957
|| || || ||||| | |||||||| | ||||| || |||||||||||||| || |||
Sbjct 18848714 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 18848655
Query 13958 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13993
|||||||| ||||| ||||| || ||||||||||||
Sbjct 18848654 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 18848619
Score = 87.8 bits (96), Expect = 2e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 14473 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTG 14532
|||||| || |||||||| | |||||||||||||| |||||||||||||| || || ||
Sbjct 18845044 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 18844985
Query 14533 AAAACCATAAAAACATCTAGCTTCTG 14558
|| ||||| ||||| | |||||||
Sbjct 18844984 GAAGCCATAGAAACAGCGGGCTTCTG 18844959
>seq201
Length=5903822
Score = 107 bits (118), Expect = 2e-18
Identities = 225/330 (68%), Gaps = 14/330 (4%)
Strand=Plus/Minus
Query 14426 ATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTACT-TGAAATGTATGTATC 14484
||||||||||| |||| ||| | | |||||| || || ||| | | |||||| || ||
Sbjct 3664459 ATTGTTTCAATGGCATCAAAGACAAATTCCTTTTCCTT-GTAATCTTTAATGTAAGTGTC 3664401
Query 14485 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14544
| || | |||| |||||||| | |||||| ||||| | || || || ||| | ||
Sbjct 3664400 ATTACAGATACTATGTATTTCAGAATATATGTTATCCATGGTAATTTGGAAGCCAAAGAA 3664341
Query 14545 ACATCTAGCTTCTGACCATTGTACCTCTGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14604
||| ||||||| || ||| | ||||| || | || |||||||| ||
Sbjct 3664340 ACAGTGGGCTTCTGTAATCTGAGTTTCTTGGCTAAATCACTCCACTAAGTTTTCATTCAC 3664281
Query 14605 TATACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTT 14660
||| |||| || |||||||| || ||| ||||| | |||||||||| ||| |
Sbjct 3664280 TATGCCATTCCTTGCTGCAAAGAACACCAGTGCATATGAT----ATAAAGTATTTCTCCT 3664225
Query 14661 CATTGCTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGT 14718
|| | || || | | | ||| || |||| ||||||||| || || ||| ||
Sbjct 3664224 CAGGCTTCAGGGCTTCCTAGT--GCTGAATGTCCTCAGAAAGATCCACCTCCTCAGTGGT 3664167
Query 14719 CCAAAAACTAGCAACAGCTTTTTTATACAT 14748
||||||| ||| ||||||| || |||||
Sbjct 3664166 CCAAAAAGAAGCCTCAGCTTTCTTGTACAT 3664137
>seq27
Length=27113625
Score = 100 bits (110), Expect = 3e-16
Identities = 122/164 (74%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 14186 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 14245
|| |||||||| |||| || ||||| ||||| || | ||||||||||| |||||||||
Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085
Query 14246 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG-C 14304
|| || ||||||| | | | ||||| ||| ||| || || | ||| || ||| |
Sbjct 23269086 TCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144
Query 14305 GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTA 14348
|| || || |||||||| |||| || ||||| ||||| ||||
Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA 23269188
>seq1
Length=63721086
Score = 91.5 bits (100), Expect = 1e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 13916 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13975
|||||||| ||||| |||||||||||| || ||||| ||||||| || |||||||||
Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832
Query 13976 ATAAAATCAAATGGATTT 13993
||||||||||| ||||||
Sbjct 1725833 ATAAAATCAAAGGGATTT 1725850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 482221998940000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |