Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_003389.1
Length=146454
Score E
Sequences producing significant alignments: (Bits) Value
seq3 250 2e-61
seq205 242 3e-59
seq260 239 4e-58
seq4595 235 5e-57
seq1663 223 3e-53
seq50 176 4e-39
seq140 123 2e-23
seq131 118 1e-21
seq58 118 1e-21
seq42 113 4e-20
seq27 113 4e-20
seq1 107 2e-18
>seq3
Length=52730029
Score = 250 bits (276), Expect = 2e-61
Identities = 470/686 (69%), Gaps = 10/686 (1%)
Strand=Plus/Plus
Query 11301 AAAATATATTCTCTTCTTTATTTGTAAACACCCCCATCTTTTGATATTCACTAACTCGTC 11360
|||||| ||||||| | ||| | ||| |||||||| |||||||| | |||| |
Sbjct 13968538 AAAATA-ATTCTCTGTAGGACTTGACATCACTCCCATCTTCTGATATTCGCCTACTCTTT 13968596
Query 11361 GTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTAT 11420
|| | || ||||||| ||||| ||||| ||| |||||| ||| ||| ||||| |
Sbjct 13968597 TCTCACAGAAGTTAGTCTGCCCTTCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTT 13968656
Query 11421 ATACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTA 11480
||| ||||| | || | | |||| | || | | ||| ||||| || ||||| |
Sbjct 13968657 CTACTTTGAACATCTTATTAAAACCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAA 13968716
Query 11481 TATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCA 11540
| ||| ||||||| |||||||| || |||| | ||| || | || | || |
Sbjct 13968717 TGTACCACTTCATTAAAGTGCAATTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAA 13968776
Query 11541 AAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATG 11600
|||||||| ||||| |||| |||| ||| ||||| ||| | || || |
Sbjct 13968777 GAAACTCCTATTCTAGCCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAG 13968836
Query 11601 GTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTC 11660
|| |||| | ||||| ||||||| || ||||| ||||| || ||||| || ||||
Sbjct 13968837 GTTTGTGTAGCAGGTGTTTGAACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTC 13968896
Query 11661 TACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAA 11720
| || || || ||||| |||||||| | || ||||| ||||| || || | ||| |
Sbjct 13968897 TGCTAATAAGGTCATTGGAAAATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGA 13968956
Query 11721 ATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTC 11780
|||| | ||||||||||||||| |||| |||| ||||| |||||||| ||| | || |
Sbjct 13968957 ATATTGATGCAAATGAACCAGAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACAC 13969016
Query 11781 TTTCTCCATAT--ACCTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTT 11837
|| |||||| | ||| || | | |||| ||||||||| |||||| | |
Sbjct 13969017 GATCCCCATATGTAGCTTCTTTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCT 13969076
Query 11838 TTACGCATTCCATTGTTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCT 11895
| || || ||| |||| || || ||||| | ||| | | | || | || |
Sbjct 13969077 TCACACAAGGCATCCTTTCAATGGCATTAAAGAGAAATTCCCTGTCCTTAGA----CTTT 13969132
Query 11896 TACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTG 11955
| || || || || | | |||||||||||| ||||| || |||||||| || |||||
Sbjct 13969133 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCGATTTG 13969192
Query 11956 AAATCCATAGAAACATCGTGCCTCTG 11981
|| ||||||||||| | || ||||
Sbjct 13969193 GAAGCCATAGAAACAGTGGGCTTCTG 13969218
>seq205
Length=6054944
Score = 242 bits (268), Expect = 3e-59
Identities = 500/733 (68%), Gaps = 18/733 (2%)
Strand=Plus/Plus
Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTA 11387
||| ||||| | ||||||||||| |||| || | || | || ||| |||| ||||| |
Sbjct 2460978 CACTCCCATTCTCTGATATTCACTTACTC-TCTTCTCAGAGAAGTTACTCTTTCCTTCCA 2461036
Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447
|||| |||| |||||| ||| ||| ||| | | ||| ||||| || | | | |||| |
Sbjct 2461037 GTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCCA 2461096
Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507
|| | | || ||| ||||| |||||| || |||| ||||||| |||||||
Sbjct 2461097 GTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTCA 2461156
Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567
| || ||||| | ||| || | || | || | ||||||| |||||| |||| ||||
Sbjct 2461157 TTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCAT 2461216
Query 11568 CAATGATTATCGACGTTA-TAACTTC-CTTAGATGGTGGATGTAATAAATGTTTAAACAT 11625
||| ||||| ||| | || | ||| | ||| |||| | ||||| ||| |
Sbjct 2461217 TAATAATTATTTCTTTTACTCTCTGCTCTT--AAGGTTTTTGTAGAAGGTGTTTGAACGT 2461274
Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685
|| || ||||| ||||| || ||||| || ||||| || | |||||||| ||||||||
Sbjct 2461275 TAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGGAAAATGT 2461334
Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745
| || ||| | || | || || | ||| || || | |||| ||| |||||||
Sbjct 2461335 CAGACCAGGC-----TTCTTGCTTCTTGAGCCAGAACATTGATACAAAAGAATCAGAAAA 2461389
Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTT-GTTGCT 11802
||| | ||| ||||| | |||||| ||||| || |||||||| || ||| |||
Sbjct 2461390 GAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTTCTTTGTC 2461449
Query 11803 AGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862
||||| | ||||||||| || ||||| || | || || ||||| || |
Sbjct 2461450 CCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTTCAATGAC 2461509
Query 11863 GTTAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920
||||| ||| ||| |||| || |||| | || || | || | | ||||
Sbjct 2461510 ATTAAAGAAA--AATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGAGACTA 2461567
Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980
|||||||| ||||| || ||||||| || ||||| |||||||||||||| | | |||
Sbjct 2461568 TACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGACTTCT 2461627
Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040
| | ||| || | |||| ||| | || || ||||| || || ||||||||
Sbjct 2461628 GTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCATCACTT 2461687
Query 12041 GATGCAAAAAATG 12053
| |||||| ||||
Sbjct 2461688 GCTGCAAAGAATG 2461700
>seq260
Length=4071714
Score = 239 bits (264), Expect = 4e-58
Identities = 504/741 (68%), Gaps = 32/741 (4%)
Strand=Plus/Minus
Query 11330 ACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTAG 11388
|| |||||||| |||||| | |||| || | || || || |||||||| ||||| ||
Sbjct 1910049 ACTCCCATCTTCTGATATCTGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTTCCAG 1909991
Query 11389 TGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAA 11448
||| |||| |||||| ||| ||| ||||| | ||| ||||| | || | | |||| ||
Sbjct 1909990 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAA 1909931
Query 11449 CTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCAT 11508
|| | || ||| |||| ||| | |||||| ||||| ||
Sbjct 1909930 TTCCAGCATTAGTCT---------GAATG-----TACCGCTTAATTAAAGTGCAATTAAT 1909885
Query 11509 ACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC 11568
| ||||| | ||| || | || |||| | ||||||| |||||| |||| | ||
Sbjct 1909884 TCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACAGAATT 1909825
Query 11569 AATGATTATCGACGTTATAACT---TCCTTAGATGGTGGATGTAATAAATGTTTAAACAT 11625
| | ||||| || | ||||| | || || ||| |||| | || ||| |||||
Sbjct 1909824 AGTAATTATTGA---TTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAACAT 1909768
Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685
|| ||| ||| | |||| || ||||| || ||||| || || |||||||| | ||||||
Sbjct 1909767 TAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAATGT 1909708
Query 11686 TAATCCGGGCATCAATCCTCGttttttt-ATCCAAAATATAGCAGCAAATGAACCAGAAA 11744
| || ||||| | |||||| |||||| | ||| |||| | ||||| |||| |||||
Sbjct 1909707 CAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGAAA 1909648
Query 11745 AGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCT 11802
|||| ||||| |||| |||||||| ||||| || | || ||| || ||| || |
Sbjct 1909647 AGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTTGT 1909588
Query 11803 AGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAG 11861
| |||| ||||||||| || ||||| || || || || ||| | || |
Sbjct 1909587 CCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAATGG 1909528
Query 11862 CGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACT 11919
| ||||| | ||| | |||| || | | || | | || || || || | | |||
Sbjct 1909527 CATTAAAGAGAAATTCCCTTTTCTTAGA--AACTTTAATGTAAGTGTCAATAAGGAGACT 1909470
Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979
||||||||| ||||| || ||||| || | ||||| || ||||||||||| | || ||
Sbjct 1909469 ATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTC 1909410
Query 11980 TG-AACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCAC 12038
|| |||| || || || ||||| ||| | || || ||||| || || ||||||
Sbjct 1909409 TGTAACA-TGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCAT 1909351
Query 12039 TAGATGCAAAAAATGCTAGTA 12059
| | |||||| ||||| ||||
Sbjct 1909350 TTGCTGCAAAGAATGCCAGTA 1909330
>seq4595
Length=7281
Score = 235 bits (260), Expect = 5e-57
Identities = 492/720 (68%), Gaps = 20/720 (3%)
Strand=Plus/Minus
Query 11369 AAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATATACATTG 11428
||| |||||| |||||| |||| |||| |||||| ||| ||| |||| | ||| |||
Sbjct 6867 AAAGTAGTCTC-CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTG 6809
Query 11429 AAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGA 11488
|| || || | | |||| | || | || ||||| ||| | |||||| |||||| |
Sbjct 6808 AACACCTTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGC 6749
Query 11489 GACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCC 11548
||||||| ||||||| || ||||| | ||| || | || | || | ||||||
Sbjct 6748 TTCATTAAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCC 6689
Query 11549 TTTTCTATATTAACCGCATCAATGATTATCGACGTTA---TAACTTCCTTAGATGGTGGA 11605
| |||||| ||| | || || ||||| ||| | |||| || | ||
Sbjct 6688 TGTTCTATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTT-TG-- 6632
Query 11606 TGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTT 11665
|||| | ||||| |||| || || |||| ||||| || ||||| || |||| ||
Sbjct 6631 TGTAGCAGGTGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTA 6572
Query 11666 ATTAGTTCATTAG-AAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATAT 11724
|| |||||||| | ||||||| | || ||||| | | ||| ||| || | ||| |||||
Sbjct 6571 ATAAGTTCATTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATAT 6512
Query 11725 AGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTC 11784
| ||||| |||||||||||||| ||||| ||||| |||||||| ||||| || | ||
Sbjct 6511 TGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTC 6452
Query 11785 TCCATA--TACCTTGTT--GCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTA 11840
||||| || || || || | ||||| | ||||||| || ||||| || |
Sbjct 6451 CCCATAGGTAATTTCTTTGTCTCCA-ATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCA 6393
Query 11841 CGCATTCCATTGTTTCTATAGCGTTAA--ATAAATGCATTTTTTCTATATTATCTCTTAC 11898
| || ||| |||| || || |||| | |||| | |||| || |||| | |
Sbjct 6392 CACAAGGCATCATTTCAATGGCATTAAAGAGAAATTC--CCTTTCCTTAGAATCTTTCAA 6335
Query 11899 ATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAA 11958
|| || || || | | |||||||||||| ||||| || |||||||| | ||||| ||
Sbjct 6334 ATCAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAA 6275
Query 11959 TCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATT 12018
||||||||||| | || |||| | || || || |||| ||| | || ||
Sbjct 6274 GCCATAGAAACAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTT 6215
Query 12019 CTCATTTACAATACCATCACTAGATGCAAAAAATGC--TAGTATATGTTTTATAAAGTAT 12076
| ||| || || |||||||| | ||| || ||||| |||| |||| | | ||||||
Sbjct 6214 TTTATTCACTATGCCATCACTTGCTGC-AAGAATGCCACAGTACATGTGATGTGAAGTAT 6156
>seq1663
Length=17039
Score = 223 bits (246), Expect = 3e-53
Identities = 503/747 (67%), Gaps = 18/747 (2%)
Strand=Plus/Minus
Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTA 11387
||| ||||| || |||||||| | || |||| || | || |||||||| |||| |
Sbjct 3193 CACTCCCATTTTCTGATATTCGCCTGTTC-TCGTCTCACAGAAGTTAGTCTTCCCTTTCA 3135
Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447
|||| | || |||||| ||| ||| ||||| | ||| || || | || | | |||| |
Sbjct 3134 GTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAACCCA 3075
Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507
|| | || ||| ||||| |||||||| || ||| | ||||||| |||||||
Sbjct 3074 GTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAATTCA 3015
Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567
| || ||| | | ||| || | || | || || |||| || |||||| ||| ||||
Sbjct 3014 TTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTATCCCAACAGCAT 2956
Query 11568 CAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTA 11627
||| ||||| ||| | || || ||| |||| | ||||| ||| |||
Sbjct 2955 TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACGTTA 2896
Query 11628 AACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTA 11687
||| ||||| ||||| || ||||| || ||||| || || |||||||| |||||||| |
Sbjct 2895 GACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTCA 2836
Query 11688 ATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGA 11747
|| ||||| | |||| | || | | ||| | || | ||||| |||||||||||||
Sbjct 2835 GACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCAGAAAAGA 2776
Query 11748 ATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATA 11807
||||| ||||| |||||||| | ||| | | | | |||| ||| |
Sbjct 2775 CGATTCCTTCCACTGCTGCAAA-GGTAC------ATAGGTAGCTTCTTTGTCCCTA---A 2726
Query 11808 TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAA 11867
| || ||||||||| || ||||| || || || || ||| || || ||||
Sbjct 2725 TTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAAATGGCATTAA 2666
Query 11868 --ATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACAT 11925
| |||| | |||| || |||| | | || || || || | | |||||||||
Sbjct 2665 AGAGAAATTC--CCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACAT 2608
Query 11926 TTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACA 11985
||| ||||| || |||||||| || ||||| || ||||||||||| || | |||| |
Sbjct 2607 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCG-GGTTCTGTAAT 2549
Query 11986 CTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGC 12045
|| || | ||||| ||| | || || |||||||| || ||||||| | ||
Sbjct 2548 TTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCACTTGCCGC 2489
Query 12046 AAAAAATGCTAGTATATGTTTTATAAA 12072
|| || || |||| |||| ||| ||
Sbjct 2488 TAAGAACGCCAGTACATGTGATATGAA 2462
>seq50
Length=19932738
Score = 176 bits (194), Expect = 4e-39
Identities = 491/747 (66%), Gaps = 31/747 (4%)
Strand=Plus/Minus
Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAA-TTAGTCTTACCTTCTA 11387
||| ||||| | ||| |||| | ||| | || |||||| |||||||| ||||| |
Sbjct 2663293 CACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCA 2663234
Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447
|||| |||| |||||| ||| ||| ||||| | ||| ||||| || || | | |||| |
Sbjct 2663233 GTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCA 2663174
Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507
|| | || ||| ||||| | |||||| || ||| | ||||||| |||||||
Sbjct 2663173 GTTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCA 2663114
Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567
| || ||||| | ||| || | | | || | |||| || |||||| |||| ||||
Sbjct 2663113 TTCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT 2663054
Query 11568 CAATGATTATCGACGTTATAACT-TCCTTAGATGGTGGATGTAATAAATGTTTAAACATT 11626
|| ||||| | ||| || | || | ||| |||| | ||||| || |
Sbjct 2663053 TAACAATTATTT-CTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAGG 2662995
Query 11627 AAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTT 11686
|||||||| | || ||||| || || | |||||| ||||||||
Sbjct 2662994 ---CACGCAAAGCCTCA-------------TCTCTGCTAATAATTTCATTGGAAAATGTG 2662951
Query 11687 AATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAAC-CAGAAAA 11745
| || ||||| | |||| || || | | || || | ||||| || |||||||
Sbjct 2662950 AGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAAA 2662891
Query 11746 GAATATTCCCTCCACAGCT--GCAAATGCTACTACTCTTTC----TCCATA--TACCTTG 11797
||| | ||| ||||| | | ||||| || | || | || ||||| | | |||
Sbjct 2662890 GAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTTG 2662831
Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857
| |||| |||| ||||||||| | |||||| ||||| || |||||||||
Sbjct 2662830 TCCCTAG---TCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCA 2662774
Query 11858 ATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAA 11917
|| | | || | | | |||| || |||| | | || || || || | | |
Sbjct 2662773 ATGCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGA 2662714
Query 11918 CTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCC 11977
|||||||||| ||| | || | |||||| || ||||| || |||||||||| || ||
Sbjct 2662713 CTATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCT 2662654
Query 11978 TCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCA 12037
||| | ||| || || ||||| ||| | || || ||||| || || ||||||
Sbjct 2662653 TCTATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCA 2662594
Query 12038 CTAGATGCAAAAAATGCTAGTATATGT 12064
|| | |||||| ||||| |||| ||||
Sbjct 2662593 CTTGCTGCAAATAATGCCAGTACATGT 2662567
>seq140
Length=9235476
Score = 123 bits (136), Expect = 2e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197
|||||||| ||||| ||||| ||||| | ||||| || ||||| ||||| |||||||||
Sbjct 5935768 ACCTGAAATTCTCCTGATAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 5935827
Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257
||||||||||| | | |||||||| || || |||||||||||||| || ||||| |
Sbjct 5935828 GACTCATTATTTCCCAGTATTTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATTAGTAAA 5935887
Query 37258 CTATTTCTCAATCCAT 37273
|| ||||| | ||||
Sbjct 5935888 CTGTTTCTTACACCAT 5935903
Score = 91.5 bits (100), Expect = 1e-13
Identities = 103/138 (75%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 38412 AGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATT 38471
||| || || || || | |||||||| ||||| | ||||| ||||| || | | ||
Sbjct 5960806 AGTACCAGCATTGAAAAGAGTAGGAGAGGCATGAGTAAACCACTTTTCAGAAAGAAGGTT 5960865
Query 38472 ATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAG 38531
|||||||| || || |||| || || | |||||| || | |||||||||||| |
Sbjct 5960866 GTATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATTCCCACAGATACCCTCATCAA 5960925
Query 38532 CATATGTTGTGGTCTTTC 38549
||||||||||||||||||
Sbjct 5960926 CATATGTTGTGGTCTTTC 5960943
>seq131
Length=9795181
Score = 118 bits (130), Expect = 1e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || ||||||||||||||||| | || ||||| | |||||| || ||
Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| ||||| | ||||| |||||||||||||| ||||| ||||| |||||||| |||
Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613
Query 11774 ACTAC 11778
|| ||
Sbjct 9778614 ACAAC 9778618
>seq58
Length=18876681
Score = 118 bits (130), Expect = 1e-21
Identities = 101/125 (81%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || ||||||||||||||||| | || ||||| | |||||| || ||
Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| ||||| | ||||| |||||||||||||| ||||| ||||| |||||||| |||
Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572
Query 11774 ACTAC 11778
|| ||
Sbjct 18847571 ACAAC 18847567
>seq42
Length=21960898
Score = 113 bits (124), Expect = 4e-20
Identities = 295/446 (66%), Gaps = 33/446 (7%)
Strand=Plus/Minus
Query 11334 CCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATA 11393
||||| | |||||||| || || | || || |||||||| ||||| ||||| |
Sbjct 1725116 CCATCCTGTGATATTCCCTTAC--------CAAAGAAGTTAGTCTTCCCTTCCAGTGAAA 1725065
Query 11394 TATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTG 11453
||| |||||||||| ||| | ||| ||| || | || || | | |||||| ||
Sbjct 1725064 TATGCTCCATAAAGTCAAATGTATTTCCTACTCTGCACACCTTGTTAAAACCTAGCTGC- 1725006
Query 11454 TTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTA 11513
| || ||||||| || ||||| || ||| ||||||| || ||| | | |
Sbjct 1725005 ---AGCAT-TATCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAGTTCCTTTCAA 1724950
Query 11514 TAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGA 11573
|||| |||| || | | | || | ||||| | |||||| | || |||| || ||
Sbjct 1724949 TAAGCTCCATAGGCAAGACCTCAGTAAGGAACTCTTGTTCTATCCTGACAGCATTAACGA 1724890
Query 11574 TTATCGACGTTATAACTTCCTTA-GATGGTGGATGTAATAAATGTTTAAACATTAAACAC 11632
|| | | || | || ||| || | | |||| | | |||| ||
Sbjct 1724889 TTGTTT-CTTTTTCTCTCTCTTCTGAAGATTTGTGTAGCAGGT--------ATTAGGCAG 1724839
Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692
|||| ||||||||||||| || |||| || || | || ||| |||||||| || ||
Sbjct 1724838 ACAAAGCCACAATGTAAACCCTCATCTCAGCTAATAAATTAATTGGAAAATGTGAACCCA 1724779
Query 11693 GGCATCAATCCTCGttt------ttttATCCAAAATAT---AGCAGCAAATGAACCAGAA 11743
||||| ||| || |||| || ||||| ||||| |||| ||| |||||||||
Sbjct 1724778 GGCATTAATTCTTGTTTCCAGGCATTAATCCAGAATATCAATGCAG-AAAAGAACCAGAA 1724720
Query 11744 AAGAATATTCCCTCCACAGCTGCAAA 11769
||||| ||||| || ||||||||||
Sbjct 1724719 AAGAAGATTCCTTCTGCAGCTGCAAA 1724694
>seq27
Length=27113625
Score = 113 bits (124), Expect = 4e-20
Identities = 131/174 (75%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 11606 TGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTT 11665
||||| | ||||||||||||| || ||||| ||||| || ||||| || ||||| ||
Sbjct 23269020 TGTAACAGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTA 23269079
Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725
|| |||||||| ||||||| | | | ||||| ||| ||| || || | ||| || |
Sbjct 23269080 ATAAGTTCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTT 23269138
Query 11726 GCAG-CAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTAC 11778
| | ||| |||||||||||||| |||| || || |||||||| ||||| ||
Sbjct 23269139 GATGAAAAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTACAAC 23269192
>seq1
Length=63721086
Score = 107 bits (118), Expect = 2e-18
Identities = 104/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713
|| ||||| || || ||||| || ||||| || | ||| ||||| | |||| || |||
Sbjct 1747007 TCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCTTT 1747066
Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773
| ||| |||||||||||||| || ||||| ||||| || || || ||||| ||||| |||
Sbjct 1747067 AGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 1747126
Query 11774 ACTACTCTTTCTCC 11787
|| || ||||| ||
Sbjct 1747127 ACCACCCTTTCCCC 1747140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 468404740520000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |