Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq3 250 2e-61 seq205 242 3e-59 seq260 239 4e-58 seq4595 235 5e-57 seq1663 223 3e-53 seq50 176 4e-39 seq140 123 2e-23 seq131 118 1e-21 seq58 118 1e-21 seq42 113 4e-20 seq27 113 4e-20 seq1 107 2e-18 >seq3 Length=52730029 Score = 250 bits (276), Expect = 2e-61 Identities = 470/686 (69%), Gaps = 10/686 (1%) Strand=Plus/Plus Query 11301 AAAATATATTCTCTTCTTTATTTGTAAACACCCCCATCTTTTGATATTCACTAACTCGTC 11360 |||||| ||||||| | ||| | ||| |||||||| |||||||| | |||| | Sbjct 13968538 AAAATA-ATTCTCTGTAGGACTTGACATCACTCCCATCTTCTGATATTCGCCTACTCTTT 13968596 Query 11361 GTTCGAAAAAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTAT 11420 || | || ||||||| ||||| ||||| ||| |||||| ||| ||| ||||| | Sbjct 13968597 TCTCACAGAAGTTAGTCTGCCCTTCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTT 13968656 Query 11421 ATACATTGAAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTA 11480 ||| ||||| | || | | |||| | || | | ||| ||||| || ||||| | Sbjct 13968657 CTACTTTGAACATCTTATTAAAACCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAA 13968716 Query 11481 TATACTGAGACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCA 11540 | ||| ||||||| |||||||| || |||| | ||| || | || | || | Sbjct 13968717 TGTACCACTTCATTAAAGTGCAATTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAA 13968776 Query 11541 AAAACTCCTTTTCTATATTAACCGCATCAATGATTATCGACGTTATAACTTCCTTAGATG 11600 |||||||| ||||| |||| |||| ||| ||||| ||| | || || | Sbjct 13968777 GAAACTCCTATTCTAGCCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAG 13968836 Query 11601 GTGGATGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTC 11660 || |||| | ||||| ||||||| || ||||| ||||| || ||||| || |||| Sbjct 13968837 GTTTGTGTAGCAGGTGTTTGAACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTC 13968896 Query 11661 TACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAA 11720 | || || || ||||| |||||||| | || ||||| ||||| || || | ||| | Sbjct 13968897 TGCTAATAAGGTCATTGGAAAATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGA 13968956 Query 11721 ATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTC 11780 |||| | ||||||||||||||| |||| |||| ||||| |||||||| ||| | || | Sbjct 13968957 ATATTGATGCAAATGAACCAGAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACAC 13969016 Query 11781 TTTCTCCATAT--ACCTTGTTGCTAGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTT 11837 || |||||| | ||| || | | |||| ||||||||| |||||| | | Sbjct 13969017 GATCCCCATATGTAGCTTCTTTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCT 13969076 Query 11838 TTACGCATTCCATTGTTTCTATAGCGTTAAATA--AATGCATTTTTTCTATATTATCTCT 11895 | || || ||| |||| || || ||||| | ||| | | | || | || | Sbjct 13969077 TCACACAAGGCATCCTTTCAATGGCATTAAAGAGAAATTCCCTGTCCTTAGA----CTTT 13969132 Query 11896 TACATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTG 11955 | || || || || | | |||||||||||| ||||| || |||||||| || ||||| Sbjct 13969133 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCGATTTG 13969192 Query 11956 AAATCCATAGAAACATCGTGCCTCTG 11981 || ||||||||||| | || |||| Sbjct 13969193 GAAGCCATAGAAACAGTGGGCTTCTG 13969218 >seq205 Length=6054944 Score = 242 bits (268), Expect = 3e-59 Identities = 500/733 (68%), Gaps = 18/733 (2%) Strand=Plus/Plus Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTA 11387 ||| ||||| | ||||||||||| |||| || | || | || ||| |||| ||||| | Sbjct 2460978 CACTCCCATTCTCTGATATTCACTTACTC-TCTTCTCAGAGAAGTTACTCTTTCCTTCCA 2461036 Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447 |||| |||| |||||| ||| ||| ||| | | ||| ||||| || | | | |||| | Sbjct 2461037 GTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCCA 2461096 Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507 || | | || ||| ||||| |||||| || |||| ||||||| ||||||| Sbjct 2461097 GTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTCA 2461156 Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567 | || ||||| | ||| || | || | || | ||||||| |||||| |||| |||| Sbjct 2461157 TTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCAT 2461216 Query 11568 CAATGATTATCGACGTTA-TAACTTC-CTTAGATGGTGGATGTAATAAATGTTTAAACAT 11625 ||| ||||| ||| | || | ||| | ||| |||| | ||||| ||| | Sbjct 2461217 TAATAATTATTTCTTTTACTCTCTGCTCTT--AAGGTTTTTGTAGAAGGTGTTTGAACGT 2461274 Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 || || ||||| ||||| || ||||| || ||||| || | |||||||| |||||||| Sbjct 2461275 TAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGGAAAATGT 2461334 Query 11686 TAATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAA 11745 | || ||| | || | || || | ||| || || | |||| ||| ||||||| Sbjct 2461335 CAGACCAGGC-----TTCTTGCTTCTTGAGCCAGAACATTGATACAAAAGAATCAGAAAA 2461389 Query 11746 GAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTT-GTTGCT 11802 ||| | ||| ||||| | |||||| ||||| || |||||||| || ||| ||| Sbjct 2461390 GAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTTCTTTGTC 2461449 Query 11803 AGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGC 11862 ||||| | ||||||||| || ||||| || | || || ||||| || | Sbjct 2461450 CCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTTCAATGAC 2461509 Query 11863 GTTAAATAAATGCATT--TTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTA 11920 ||||| ||| ||| |||| || |||| | || || | || | | |||| Sbjct 2461510 ATTAAAGAAA--AATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGAGACTA 2461567 Query 11921 TACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCT 11980 |||||||| ||||| || ||||||| || ||||| |||||||||||||| | | ||| Sbjct 2461568 TACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGACTTCT 2461627 Query 11981 GAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTA 12040 | | ||| || | |||| ||| | || || ||||| || || |||||||| Sbjct 2461628 GTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCATCACTT 2461687 Query 12041 GATGCAAAAAATG 12053 | |||||| |||| Sbjct 2461688 GCTGCAAAGAATG 2461700 >seq260 Length=4071714 Score = 239 bits (264), Expect = 4e-58 Identities = 504/741 (68%), Gaps = 32/741 (4%) Strand=Plus/Minus Query 11330 ACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTAG 11388 || |||||||| |||||| | |||| || | || || || |||||||| ||||| || Sbjct 1910049 ACTCCCATCTTCTGATATCTGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTTCCAG 1909991 Query 11389 TGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAA 11448 ||| |||| |||||| ||| ||| ||||| | ||| ||||| | || | | |||| || Sbjct 1909990 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAA 1909931 Query 11449 CTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCAT 11508 || | || ||| |||| ||| | |||||| ||||| || Sbjct 1909930 TTCCAGCATTAGTCT---------GAATG-----TACCGCTTAATTAAAGTGCAATTAAT 1909885 Query 11509 ACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATC 11568 | ||||| | ||| || | || |||| | ||||||| |||||| |||| | || Sbjct 1909884 TCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACAGAATT 1909825 Query 11569 AATGATTATCGACGTTATAACT---TCCTTAGATGGTGGATGTAATAAATGTTTAAACAT 11625 | | ||||| || | ||||| | || || ||| |||| | || ||| ||||| Sbjct 1909824 AGTAATTATTGA---TTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAACAT 1909768 Query 11626 TAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGT 11685 || ||| ||| | |||| || ||||| || ||||| || || |||||||| | |||||| Sbjct 1909767 TAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAATGT 1909708 Query 11686 TAATCCGGGCATCAATCCTCGttttttt-ATCCAAAATATAGCAGCAAATGAACCAGAAA 11744 | || ||||| | |||||| |||||| | ||| |||| | ||||| |||| ||||| Sbjct 1909707 CAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGAAA 1909648 Query 11745 AGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATA--TACCTTGTTGCT 11802 |||| ||||| |||| |||||||| ||||| || | || ||| || ||| || | Sbjct 1909647 AGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTTGT 1909588 Query 11803 AGATA-TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAG 11861 | |||| ||||||||| || ||||| || || || || ||| | || | Sbjct 1909587 CCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAATGG 1909528 Query 11862 CGTTAAATA--AATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACT 11919 | ||||| | ||| | |||| || | | || | | || || || || | | ||| Sbjct 1909527 CATTAAAGAGAAATTCCCTTTTCTTAGA--AACTTTAATGTAAGTGTCAATAAGGAGACT 1909470 Query 11920 ATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTC 11979 ||||||||| ||||| || ||||| || | ||||| || ||||||||||| | || || Sbjct 1909469 ATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTC 1909410 Query 11980 TG-AACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCAC 12038 || |||| || || || ||||| ||| | || || ||||| || || |||||| Sbjct 1909409 TGTAACA-TGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCAT 1909351 Query 12039 TAGATGCAAAAAATGCTAGTA 12059 | | |||||| ||||| |||| Sbjct 1909350 TTGCTGCAAAGAATGCCAGTA 1909330 >seq4595 Length=7281 Score = 235 bits (260), Expect = 5e-57 Identities = 492/720 (68%), Gaps = 20/720 (3%) Strand=Plus/Minus Query 11369 AAATTAGTCTTACCTTCTAGTGATATATACTCCATAAAGCTAAAAGGATTATATACATTG 11428 ||| |||||| |||||| |||| |||| |||||| ||| ||| |||| | ||| ||| Sbjct 6867 AAAGTAGTCTC-CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTG 6809 Query 11429 AAGACTTTTTCACAACCTAACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGA 11488 || || || | | |||| | || | || ||||| ||| | |||||| |||||| | Sbjct 6808 AACACCTTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGC 6749 Query 11489 GACATTAAACAACAATTCATACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCC 11548 ||||||| ||||||| || ||||| | ||| || | || | || | |||||| Sbjct 6748 TTCATTAAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCC 6689 Query 11549 TTTTCTATATTAACCGCATCAATGATTATCGACGTTA---TAACTTCCTTAGATGGTGGA 11605 | |||||| ||| | || || ||||| ||| | |||| || | || Sbjct 6688 TGTTCTATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTT-TG-- 6632 Query 11606 TGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTT 11665 |||| | ||||| |||| || || |||| ||||| || ||||| || |||| || Sbjct 6631 TGTAGCAGGTGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTA 6572 Query 11666 ATTAGTTCATTAG-AAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATAT 11724 || |||||||| | ||||||| | || ||||| | | ||| ||| || | ||| ||||| Sbjct 6571 ATAAGTTCATTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATAT 6512 Query 11725 AGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTC 11784 | ||||| |||||||||||||| ||||| ||||| |||||||| ||||| || | || Sbjct 6511 TGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTC 6452 Query 11785 TCCATA--TACCTTGTT--GCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTA 11840 ||||| || || || || | ||||| | ||||||| || ||||| || | Sbjct 6451 CCCATAGGTAATTTCTTTGTCTCCA-ATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCA 6393 Query 11841 CGCATTCCATTGTTTCTATAGCGTTAA--ATAAATGCATTTTTTCTATATTATCTCTTAC 11898 | || ||| |||| || || |||| | |||| | |||| || |||| | | Sbjct 6392 CACAAGGCATCATTTCAATGGCATTAAAGAGAAATTC--CCTTTCCTTAGAATCTTTCAA 6335 Query 11899 ATATGTATCTATTAATAAACTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAA 11958 || || || || | | |||||||||||| ||||| || |||||||| | ||||| || Sbjct 6334 ATCAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAA 6275 Query 11959 TCCATAGAAACATCGTGCCTCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATT 12018 ||||||||||| | || |||| | || || || |||| ||| | || || Sbjct 6274 GCCATAGAAACAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTT 6215 Query 12019 CTCATTTACAATACCATCACTAGATGCAAAAAATGC--TAGTATATGTTTTATAAAGTAT 12076 | ||| || || |||||||| | ||| || ||||| |||| |||| | | |||||| Sbjct 6214 TTTATTCACTATGCCATCACTTGCTGC-AAGAATGCCACAGTACATGTGATGTGAAGTAT 6156 >seq1663 Length=17039 Score = 223 bits (246), Expect = 3e-53 Identities = 503/747 (67%), Gaps = 18/747 (2%) Strand=Plus/Minus Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGT-TCGAAAAAATTAGTCTTACCTTCTA 11387 ||| ||||| || |||||||| | || |||| || | || |||||||| |||| | Sbjct 3193 CACTCCCATTTTCTGATATTCGCCTGTTC-TCGTCTCACAGAAGTTAGTCTTCCCTTTCA 3135 Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447 |||| | || |||||| ||| ||| ||||| | ||| || || | || | | |||| | Sbjct 3134 GTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAACCCA 3075 Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507 || | || ||| ||||| |||||||| || ||| | ||||||| ||||||| Sbjct 3074 GTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAATTCA 3015 Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567 | || ||| | | ||| || | || | || || |||| || |||||| ||| |||| Sbjct 3014 TTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTATCCCAACAGCAT 2956 Query 11568 CAATGATTATCGACGTTATAACTTCCTTAGATGGTGGATGTAATAAATGTTTAAACATTA 11627 ||| ||||| ||| | || || ||| |||| | ||||| ||| ||| Sbjct 2955 TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACGTTA 2896 Query 11628 AACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTA 11687 ||| ||||| ||||| || ||||| || ||||| || || |||||||| |||||||| | Sbjct 2895 GACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTCA 2836 Query 11688 ATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGA 11747 || ||||| | |||| | || | | ||| | || | ||||| ||||||||||||| Sbjct 2835 GACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCAGAAAAGA 2776 Query 11748 ATATTCCCTCCACAGCTGCAAATGCTACTACTCTTTCTCCATATACCTTGTTGCTAGATA 11807 ||||| ||||| |||||||| | ||| | | | | |||| ||| | Sbjct 2775 CGATTCCTTCCACTGCTGCAAA-GGTAC------ATAGGTAGCTTCTTTGTCCCTA---A 2726 Query 11808 TCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCTATAGCGTTAA 11867 | || ||||||||| || ||||| || || || || ||| || || |||| Sbjct 2725 TTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAAATGGCATTAA 2666 Query 11868 --ATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACAT 11925 | |||| | |||| || |||| | | || || || || | | ||||||||| Sbjct 2665 AGAGAAATTC--CCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACAT 2608 Query 11926 TTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACA 11985 ||| ||||| || |||||||| || ||||| || ||||||||||| || | |||| | Sbjct 2607 TTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGCG-GGTTCTGTAAT 2549 Query 11986 CTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGC 12045 || || | ||||| ||| | || || |||||||| || ||||||| | || Sbjct 2548 TTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCACTTGCCGC 2489 Query 12046 AAAAAATGCTAGTATATGTTTTATAAA 12072 || || || |||| |||| ||| || Sbjct 2488 TAAGAACGCCAGTACATGTGATATGAA 2462 >seq50 Length=19932738 Score = 176 bits (194), Expect = 4e-39 Identities = 491/747 (66%), Gaps = 31/747 (4%) Strand=Plus/Minus Query 11329 CACCCCCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAA-TTAGTCTTACCTTCTA 11387 ||| ||||| | ||| |||| | ||| | || |||||| |||||||| ||||| | Sbjct 2663293 CACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCA 2663234 Query 11388 GTGATATATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTA 11447 |||| |||| |||||| ||| ||| ||||| | ||| ||||| || || | | |||| | Sbjct 2663233 GTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCA 2663174 Query 11448 ACTCTGTTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCA 11507 || | || ||| ||||| | |||||| || ||| | ||||||| ||||||| Sbjct 2663173 GTTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCA 2663114 Query 11508 TACCTATAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCAT 11567 | || ||||| | ||| || | | | || | |||| || |||||| |||| |||| Sbjct 2663113 TTCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT 2663054 Query 11568 CAATGATTATCGACGTTATAACT-TCCTTAGATGGTGGATGTAATAAATGTTTAAACATT 11626 || ||||| | ||| || | || | ||| |||| | ||||| || | Sbjct 2663053 TAACAATTATTT-CTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAGG 2662995 Query 11627 AAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTT 11686 |||||||| | || ||||| || || | |||||| |||||||| Sbjct 2662994 ---CACGCAAAGCCTCA-------------TCTCTGCTAATAATTTCATTGGAAAATGTG 2662951 Query 11687 AATCCGGGCATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAAC-CAGAAAA 11745 | || ||||| | |||| || || | | || || | ||||| || ||||||| Sbjct 2662950 AGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAAA 2662891 Query 11746 GAATATTCCCTCCACAGCT--GCAAATGCTACTACTCTTTC----TCCATA--TACCTTG 11797 ||| | ||| ||||| | | ||||| || | || | || ||||| | | ||| Sbjct 2662890 GAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTTG 2662831 Query 11798 TTGCTAGATATCCATTTTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCCATTGTTTCT 11857 | |||| |||| ||||||||| | |||||| ||||| || ||||||||| Sbjct 2662830 TCCCTAG---TCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCA 2662774 Query 11858 ATAGCGTTAAATAAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAA 11917 || | | || | | | |||| || |||| | | || || || || | | | Sbjct 2662773 ATGCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGA 2662714 Query 11918 CTATACATTTCTGAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCC 11977 |||||||||| ||| | || | |||||| || ||||| || |||||||||| || || Sbjct 2662713 CTATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCT 2662654 Query 11978 TCTGAACACTGTACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCA 12037 ||| | ||| || || ||||| ||| | || || ||||| || || |||||| Sbjct 2662653 TCTATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCA 2662594 Query 12038 CTAGATGCAAAAAATGCTAGTATATGT 12064 || | |||||| ||||| |||| |||| Sbjct 2662593 CTTGCTGCAAATAATGCCAGTACATGT 2662567 >seq140 Length=9235476 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 37138 ACCTGAAAATCTCCAGATAATACTCTTCTTGTATATATATTGCTAGTATATGGTTCAATG 37197 |||||||| ||||| ||||| ||||| | ||||| || ||||| ||||| ||||||||| Sbjct 5935768 ACCTGAAATTCTCCTGATAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 5935827 Query 37198 GACTCATTATTACTTAATATTTGAGATGTAGATGCAGTAGGCATTGGTGCTATTAGAAGG 37257 ||||||||||| | | |||||||| || || |||||||||||||| || ||||| | Sbjct 5935828 GACTCATTATTTCCCAGTATTTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATTAGTAAA 5935887 Query 37258 CTATTTCTCAATCCAT 37273 || ||||| | |||| Sbjct 5935888 CTGTTTCTTACACCAT 5935903 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 38412 AGTTCCGGCGTTAAATAATGTAGGAGATGCATGTATGAACCATTTTTCCGACAAATAATT 38471 ||| || || || || | |||||||| ||||| | ||||| ||||| || | | || Sbjct 5960806 AGTACCAGCATTGAAAAGAGTAGGAGAGGCATGAGTAAACCACTTTTCAGAAAGAAGGTT 5960865 Query 38472 ATATGTTTCTATTACATCATCTATATCACCGCCGTGAATACCTAGAGATACCCTCATTAG 38531 |||||||| || || |||| || || | |||||| || | |||||||||||| | Sbjct 5960866 GTATGTTTCAATAGCAGCATCAATGTCTTCTTTGTGAATTCCCACAGATACCCTCATCAA 5960925 Query 38532 CATATGTTGTGGTCTTTC 38549 |||||||||||||||||| Sbjct 5960926 CATATGTTGTGGTCTTTC 5960943 >seq131 Length=9795181 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || ||||||||||||||||| | || ||||| | |||||| || || Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||| | ||||| |||||||||||||| ||||| ||||| |||||||| ||| Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613 Query 11774 ACTAC 11778 || || Sbjct 9778614 ACAAC 9778618 >seq58 Length=18876681 Score = 118 bits (130), Expect = 1e-21 Identities = 101/125 (81%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || ||||||||||||||||| | || ||||| | |||||| || || Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| ||||| | ||||| |||||||||||||| ||||| ||||| |||||||| ||| Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572 Query 11774 ACTAC 11778 || || Sbjct 18847571 ACAAC 18847567 >seq42 Length=21960898 Score = 113 bits (124), Expect = 4e-20 Identities = 295/446 (66%), Gaps = 33/446 (7%) Strand=Plus/Minus Query 11334 CCATCTTTTGATATTCACTAACTCGTCGTTCGAAAAAATTAGTCTTACCTTCTAGTGATA 11393 ||||| | |||||||| || || | || || |||||||| ||||| ||||| | Sbjct 1725116 CCATCCTGTGATATTCCCTTAC--------CAAAGAAGTTAGTCTTCCCTTCCAGTGAAA 1725065 Query 11394 TATACTCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTG 11453 ||| |||||||||| ||| | ||| ||| || | || || | | |||||| || Sbjct 1725064 TATGCTCCATAAAGTCAAATGTATTTCCTACTCTGCACACCTTGTTAAAACCTAGCTGC- 1725006 Query 11454 TTAATAATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTA 11513 | || ||||||| || ||||| || ||| ||||||| || ||| | | | Sbjct 1725005 ---AGCAT-TATCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAGTTCCTTTCAA 1724950 Query 11514 TAAGATCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGA 11573 |||| |||| || | | | || | ||||| | |||||| | || |||| || || Sbjct 1724949 TAAGCTCCATAGGCAAGACCTCAGTAAGGAACTCTTGTTCTATCCTGACAGCATTAACGA 1724890 Query 11574 TTATCGACGTTATAACTTCCTTA-GATGGTGGATGTAATAAATGTTTAAACATTAAACAC 11632 || | | || | || ||| || | | |||| | | |||| || Sbjct 1724889 TTGTTT-CTTTTTCTCTCTCTTCTGAAGATTTGTGTAGCAGGT--------ATTAGGCAG 1724839 Query 11633 GCAAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCG 11692 |||| ||||||||||||| || |||| || || | || ||| |||||||| || || Sbjct 1724838 ACAAAGCCACAATGTAAACCCTCATCTCAGCTAATAAATTAATTGGAAAATGTGAACCCA 1724779 Query 11693 GGCATCAATCCTCGttt------ttttATCCAAAATAT---AGCAGCAAATGAACCAGAA 11743 ||||| ||| || |||| || ||||| ||||| |||| ||| ||||||||| Sbjct 1724778 GGCATTAATTCTTGTTTCCAGGCATTAATCCAGAATATCAATGCAG-AAAAGAACCAGAA 1724720 Query 11744 AAGAATATTCCCTCCACAGCTGCAAA 11769 ||||| ||||| || |||||||||| Sbjct 1724719 AAGAAGATTCCTTCTGCAGCTGCAAA 1724694 >seq27 Length=27113625 Score = 113 bits (124), Expect = 4e-20 Identities = 131/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 11606 TGTAATAAATGTTTAAACATTAAACACGCAAAATCACAATGTAAACCTTCGTCTCTACTT 11665 ||||| | ||||||||||||| || ||||| ||||| || ||||| || ||||| || Sbjct 23269020 TGTAACAGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTA 23269079 Query 11666 ATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGtttttttATCCAAAATATA 11725 || |||||||| ||||||| | | | ||||| ||| ||| || || | ||| || | Sbjct 23269080 ATAAGTTCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTT 23269138 Query 11726 GCAG-CAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCTACTAC 11778 | | ||| |||||||||||||| |||| || || |||||||| ||||| || Sbjct 23269139 GATGAAAAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTACAAC 23269192 >seq1 Length=63721086 Score = 107 bits (118), Expect = 2e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 11654 TCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGGCATCAATCCTCGttttttt 11713 || ||||| || || ||||| || ||||| || | ||| ||||| | |||| || ||| Sbjct 1747007 TCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCTTT 1747066 Query 11714 ATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCCCTCCACAGCTGCAAATGCT 11773 | ||| |||||||||||||| || ||||| ||||| || || || ||||| ||||| ||| Sbjct 1747067 AGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 1747126 Query 11774 ACTACTCTTTCTCC 11787 || || ||||| || Sbjct 1747127 ACCACCCTTTCCCC 1747140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468404740520000