Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq260 289 3e-73
seq3 275 6e-69
seq205 264 1e-65
seq1663 244 1e-59
seq4595 242 4e-59
seq50 192 6e-44
seq131 114 1e-20
seq58 114 1e-20
seq201 104 2e-17
seq27 104 2e-17
seq1 91.5 1e-13
>seq260
Length=4071714
Score = 289 bits (320), Expect = 3e-73
Identities = 625/928 (67%), Gaps = 29/928 (3%)
Strand=Plus/Minus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || ||||| || |||||| | ||||| || |||||||||||||| || |||
Sbjct 1910055 GACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 1909996
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAA 13685
|||||||| ||||| ||||| || |||||||||||| | | |||| |||| | ||
Sbjct 1909995 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 1909936
Query 13686 CCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13745
|| | ||| ||||| || || ||| || | |||||| |||
Sbjct 1909935 CCCAATTC--------------CAGCATTAGTCTGAATGTACCGCTTAATTAAAGTGCAA 1909890
Query 13746 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 13805
|| || | || || || ||||| | | | || | || || | |||||| |||
Sbjct 1909889 TTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACA 1909830
Query 13806 GCCTCTTTTATAATAATTGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTTTA 13862
| | | |||| |||| ||| ||| | ||||| | | |||| |||
Sbjct 1909829 GAAT---TAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTG 1909773
Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922
|| |||| ||| ||| | |||| || | ||||||||||| ||||||||||| || | |
Sbjct 1909772 AACATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGA 1909713
Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAA-CCAAAATATTGCAGCAAATGACCC 13981
||||| | || ||||| | |||||| |||||| | ||| |||||| ||||| || |
Sbjct 1909712 AATGTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACT 1909653
Query 13982 GGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTT 14041
|||||||| ||||| || | ||| ||||| |||| | || || || | ||||
Sbjct 1909652 AGAAAAGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTC 1909593
Query 14042 TTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTC 14101
||||| | ||||| ||||| || | || || |||| | || || ||| |
Sbjct 1909592 TTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCC 1909533
Query 14102 AATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAA 14161
||| |||||||| | | ||||| | | |||| | | |||||| || |||||||| |
Sbjct 1909532 AATGGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAG 1909473
Query 14162 GCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGC 14221
|||||||||||||| ||||||||||| || | || || || ||||| || || | ||
Sbjct 1909472 ACTATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGC 1909413
Query 14222 TTCCG-ACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14280
||| | | || || ||||| | ||||| || |||| |||||||| ||||| ||||
Sbjct 1909412 TTCTGTAACA-TGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCAT 1909354
Query 14281 CACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTT 14340
|| | |||||||| ||||||| || || | || |||| | || ||| || |
Sbjct 1909353 CATTTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCCGGG 1909294
Query 14341 TTTTCCAAT-CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCG 14399
|| || | | || | |||||||||||||| || || || || || ||||| |||
Sbjct 1909293 CTTCTCAGTGCTGA-ATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAAGCC 1909235
Query 14400 ACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTC 14459
||||||| || ||||| | || || | ||| |||||||| | ||||| |
Sbjct 1909234 TCAGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAAGAAGACAAA--GC 1909177
Query 14460 GAAGATG--TTTCTTTAAGAATTGGTTC 14485
||||| | ||||| | || | ||||||
Sbjct 1909176 GAAGAGGATTTTCTCTCAGCAATGGTTC 1909149
>seq3
Length=52730029
Score = 275 bits (304), Expect = 6e-69
Identities = 456/653 (70%), Gaps = 8/653 (1%)
Strand=Plus/Plus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || ||||| || |||||||| | |||||||| ||| |||||||||| | |||
Sbjct 13968560 GACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCT 13968619
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAA 13685
|||||||| |||| ||||| || |||||||||||| | | |||| |||| | ||
Sbjct 13968620 TCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 13968679
Query 13686 CCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13745
|| ||||| | | | ||| || || | ||| ||||| || ||||||| |||
Sbjct 13968680 CCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAA 13968739
Query 13746 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 13805
||||| || || | ||| ||||| | | || | ||| || | ||||| |||
Sbjct 13968740 TTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACA 13968799
Query 13806 GCCTCTTTTATAATAATTG-TAATAATCTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13862
|| | | ||||| ||| | || |||| | ||||| | | || |||||
Sbjct 13968800 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 13968856
Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922
|| |||| || ||||| ||||| || | ||||||||||| |||||||| || || |||
Sbjct 13968857 AACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAA 13968916
Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982
||||| | || ||||| ||||| || || | ||| ||||||| |||||||| ||
Sbjct 13968917 AATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCA 13968976
Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042
||| |||| |||| || ||||| ||||| ||| | || || ||| | | |||| |
Sbjct 13968977 GAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCT 13969036
Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102
|||| | |||| ||||| || | ||| | || | | || ||| |||||
Sbjct 13969037 TTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCA 13969096
Query 14103 ATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14162
|| |||||||| | | ||||| | || |||| |||| |||||| || |||||||| |
Sbjct 13969097 ATGGCATTAAAGAGAAATTCCCTGTCCTTAG-ACTT-TAATGTAAGTGTCAATAAGGAGA 13969154
Query 14163 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCA 14215
|||||||||||||| |||||||||||||| || || || || ||||| || ||
Sbjct 13969155 CTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACA 13969207
>seq205
Length=6054944
Score = 264 bits (292), Expect = 1e-65
Identities = 503/738 (68%), Gaps = 21/738 (3%)
Strand=Plus/Plus
Query 13569 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCC 13628
|| || |||||| | ||||||||||| ||||| || ||| |||||||| | || ||||||
Sbjct 2460976 ATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTCC 2461035
Query 13629 AGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCT 13688
||||| ||||| ||||| || ||||||||| || | | ||||| | | | ||||
Sbjct 2461036 AGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCC 2461095
Query 13689 AGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13748
||||| | | || ||| || || | || ||||| || | ||||||| ||||||
Sbjct 2461096 AGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTC 2461155
Query 13749 ATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCC 13808
|| || || || || ||||| | | || | || || | |||||| |||||
Sbjct 2461156 ATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCA 2461215
Query 13809 TCTTTTATAATAATTG-TAATAATCTCA----TTAGAAGGAGGATATTTTAGA---TGTT 13860
| | ||||| ||| | || |||| ||| ||| | || |||| ||||
Sbjct 2461216 T---TAATAATTATTTCTTTTACTCTCTGCTCTTA-----AGGTTTTTGTAGAAGGTGTT 2461267
Query 13861 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13920
| || ||| || ||||| ||||| || | ||||||||||| || | |||||| || |
Sbjct 2461268 TGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGG 2461327
Query 13921 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACC 13980
||||||| | || ||| || | | || || | ||| || |||| |||| ||
Sbjct 2461328 AAAATGTCAGACCAGGCTTC-----TTGCTTCTTGAGCCAGAACATTGATACAAAAGAAT 2461382
Query 13981 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTT 14040
| |||||||| | ||| || |||| ||||| |||| | | |||||| | | ||||
Sbjct 2461383 CAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTT 2461442
Query 14041 TTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 14100
||||| | ||||| | ||||| || | || || || ||| || || ||||
Sbjct 2461443 CTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTT 2461502
Query 14101 CAATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 14160
|||| ||||||| ||| ||||| | || |||| | | | |||| || ||||||| |
Sbjct 2461503 CAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGA 2461562
Query 14161 AGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAG 14220
|||||||||||||| || ||| ||||||| || || || || ||||| || || |
Sbjct 2461563 GACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGA 2461622
Query 14221 CTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCAT 14280
|||| | || |||| | |||| || |||| |||||||| ||||| ||||
Sbjct 2461623 CTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCAT 2461682
Query 14281 CACTAGCTGCAAAAAATG 14298
|||| |||||||| ||||
Sbjct 2461683 CACTTGCTGCAAAGAATG 2461700
>seq1663
Length=17039
Score = 244 bits (270), Expect = 1e-59
Identities = 501/742 (68%), Gaps = 21/742 (3%)
Strand=Plus/Minus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || |||||||| |||||||| | ||| | ||| |||||||||| || |||
Sbjct 3198 GACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCT 3139
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAA 13685
| |||||| | ||| ||||| || |||||||||||| | |||||| |||| | ||
Sbjct 3138 TTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAA 3079
Query 13686 CCTAGTTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13745
|| ||||| | | || ||| || || | || ||||| || | ||||||| |||
Sbjct 3078 CCCAGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAA 3019
Query 13746 TTCATACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACA 13805
||||| || || | || ||||| | | | | || |||| || |||| |||
Sbjct 3018 TTCATTCCGATATGCTTCACAGGCAAGGCCTCGTAAAGAACTTCTGTT-CTATCCCAACA 2960
Query 13806 GCCTCTTTTATAATAATTG-TAATAATCTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13862
|| | | ||||| ||| | || |||| | ||||| | | || |||||
Sbjct 2959 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 2903
Query 13863 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13922
|| ||| ||| ||||| ||||| || | ||||||||||| ||||||||||| || |||
Sbjct 2902 AACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 2843
Query 13923 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCG 13982
||||| | || ||||| | |||| | || | | ||| | || || ||||| || ||
Sbjct 2842 AATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCA 2783
Query 13983 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTT 14042
||||||| ||||| || ||||| ||||| | | || | | |||| |
Sbjct 2782 GAAAAGACGATTCCTTCCACTGCTGCAAAGG-------------TACATAGGTAGCTTCT 2736
Query 14043 TTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCA 14102
|||| | || || ||||| || | || || || | | || || ||| |
Sbjct 2735 TTGTCCCTAATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAA 2676
Query 14103 ATAGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 14162
|| |||||||| | | ||||| | || |||| | | |||||| || |||||||| |
Sbjct 2675 ATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGA 2616
Query 14163 CTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCT 14222
|||||||||||||| |||||||||||||| || || || || ||||| || || | | |
Sbjct 2615 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGT 2557
Query 14223 TCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCA 14282
|| | ||| |||| | ||||| || |||| |||||||| ||||| |||||
Sbjct 2556 TCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCA 2497
Query 14283 CTAGCTGCAAAAAATGCCAATA 14304
|| || || || || |||| ||
Sbjct 2496 CTTGCCGCTAAGAACGCCAGTA 2475
>seq4595
Length=7281
Score = 242 bits (268), Expect = 4e-59
Identities = 616/916 (67%), Gaps = 31/916 (3%)
Strand=Plus/Minus
Query 13584 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13643
||||||| | | ||| || |||||| ||| | ||||| |||| ||||| |||
Sbjct 6890 TGATATTTGCCTATTCTGTTCTCAAAGTAGTC-----TCCCTTCTTGTGAAATATTCTCC 6836
Query 13644 ATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAAT 13703
|| || |||||| ||||| | | ||||| |||| | |||| ||||| | | || |
Sbjct 6835 ATGAAGTCAAATAGATTTTCTACTTTGAACACCTTATTAAAACCCAGTTCCAGCATTAGT 6776
Query 13704 CTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTT 13763
|||| || || || |||||||| | ||||||| ||||||| || || || ||
Sbjct 6775 CTATTTGCCATGAATTCAATATACCGCTTCATTAAAGTGCAATTCACTCCGATAAGCTTC 6716
Query 13764 ACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATT 13823
||||| | | || | || || | |||||| | || | || | || ||
Sbjct 6715 ACAGGCACGGCCTCAGTGAGGAACTCCTGTTCTATCCTAATAG--TATTAACAATTATTT 6658
Query 13824 GTAATAATCTCA-TTAGAAGGAGGATATTTTAGA---TGTTTAAAAATTAAACACGCAAA 13879
| || |||| || || ||| | | ||| ||||| || | || || ||||
Sbjct 6657 CTTTTACTCTCTGTTCCAA--AGGTTTGTGTAGCAGGTGTTTGAACACTAGGCAAGCAAT 6600
Query 13880 ATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG-AAAATGTTAATCCTGGCA 13938
||||| || | |||||| |||| ||||||||||| |||| ||||||| | || ||||
Sbjct 6599 GTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCATTTGGAAAATGTCAGACCAGGCA 6540
Query 13939 TCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCT 13998
| | | ||| ||| || | ||| ||||||| ||||| || || |||||||| ||||| |
Sbjct 6539 TAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTT 6480
Query 13999 CAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGT-TCGATATCCAT 14057
| ||||| ||||| |||| | | || ||| | | || ||||| || | |||||
Sbjct 6479 CCACTGCTGCAAAGGCTACAACACACTCCCCATAGGTAATTTCTTTGTCTCCA-ATCCAG 6421
Query 14058 TTTCTAG-CCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAA 14116
| || |||| || | || || || | | || ||| ||||||| |||||||| |
Sbjct 6420 CG-CAAGACCCAATCTGCCTTCTTCTTCACACAAGGCATCATTTCAATGGCATTAAAGAG 6362
Query 14117 ATATTCCTTCTCTTTAGTA-CTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAG 14175
| ||||| | || |||| | ||| || | || |||||||| | |||||||||||||
Sbjct 6361 AAATTCCCTTTCCTTAGAATCTTTCAAATCA-GTGTCAATAAGGAGACTATACATTTCAG 6303
Query 14176 AGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA 14235
| |||||||||||||| | || || || ||||| || || || ||||| | ||| |
Sbjct 6302 AATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAACAGCTGGCTTCTGTAATTTGAA 6243
Query 14236 CTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAA 14295
|||| | |||| || | || |||| ||| ||||| |||||||| ||||| || |
Sbjct 6242 CTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACTATGCCATCACTTGCTGC-AAGA 6184
Query 14296 ATGCCA----ATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAAT-C 14350
|||||| | |||| | | |||||| || ||| | || ||| ||| | |
Sbjct 6183 ATGCCACAGTACATGTGAT--GTGAAGTATCTCTTCTCAGGCTCCAGGGTTTCCCAGTGC 6126
Query 14351 GGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTT 14410
|| | ||| || ||||||| || | ||| | ||||||| ||| ||||||| ||
Sbjct 6125 TGA-ATGTCCGTAAAAAGATCCACCTTCTCAGCGATCCAAAAGGAAGCCTCAGCTTTCTT 6067
Query 14411 ATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATC-TCGAAGATGTTT 14469
||||| ||| || || | ||| ||| |||| | ||||| | ||| ||| |||
Sbjct 6066 GTACATCTGCCAAATATCATGGTATTCAATAAGAAAGATGACAAAGCACCGAGGAT-TTT 6008
Query 14470 CTTTAAGAATTGGTTC 14485
|| | || | ||||||
Sbjct 6007 CTCTCAGCAATGGTTC 5992
>seq50
Length=19932738
Score = 192 bits (212), Expect = 6e-44
Identities = 563/859 (66%), Gaps = 35/859 (4%)
Strand=Plus/Minus
Query 13572 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAA-GTTAGTTTTACCTTCCAG 13630
|| |||||| | ||| |||| | ||| || ||||| || |||||| || ||||||||
Sbjct 2663292 ACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAG 2663233
Query 13631 TGATATATTTTCCATAAAATCAAATGGATTTATTGACATAAACACTTTATCACAACCTAG 13690
||| ||||| ||||| || |||||||||||| | | || || || | | |||| ||
Sbjct 2663232 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAG 2663173
Query 13691 TTCTAATAGTAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCAT 13750
||| | | || ||| || || | || ||||| || | ||||||| ||||||||
Sbjct 2663172 TTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCAT 2663113
Query 13751 ACCTATTAGTTTTACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTC 13810
|| || || || ||||| | | | || | || | | |||||| ||||| |
Sbjct 2663112 TCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT- 2663054
Query 13811 TTTTATAATAATTGTAATAA---TCTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13867
| | ||| ||| ||| ||| | |||| | | || ||||| ||||
Sbjct 2663053 --TAACAATTATTTCTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAG 2662996
Query 13868 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13927
|||||||| |||||||||| ||||||| ||| || ||||||||
Sbjct 2662995 G---CACGCAAAG-------------CCTCATCTCTGCTAATAATTTCATTGGAAAATGT 2662952
Query 13928 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACC-CGGAAA 13986
| || ||||| | |||| || || | | || |||| ||||| | | ||||
Sbjct 2662951 GAGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAA 2662892
Query 13987 AGAATATTCCCTCAACTGCA--GCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTT 14044
|||| | ||| || |||| ||||| || | | || || | | ||||| |||
Sbjct 2662891 AGAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTT 2662832
Query 14045 GTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAAT 14104
|| | |||| ||||| || ||||| || || | | || ||||||||||||
Sbjct 2662831 GTCCCTAGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAAT 2662772
Query 14105 AGCATTAAATAAATATTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 14164
|| | || | | | ||| | || ||| | | ||| || || |||||||| | ||
Sbjct 2662771 GCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACT 2662712
Query 14165 ATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC 14224
|||||||| ||| |||||| |||||| || || || || |||| || || | ||||
Sbjct 2662711 ATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTT- 2662653
Query 14225 CGACCAT-TGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCAC 14283
| | || || ||||| | ||||| || |||| |||||||| ||||| |||||||
Sbjct 2662652 CTATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCAC 2662593
Query 14284 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14343
| |||||||| ||||||| || | | ||| | | || ||| ||| || || |||
Sbjct 2662592 TTGCTGCAAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAGTTT 2662533
Query 14344 TCCAAT-CGGATAAATCCTTAGAAAGA-----TCTACTTCATCAACTGTCCAAAAACTAG 14397
||| | | || | ||||||| |||| || || || ||| |||||||||| ||
Sbjct 2662532 CCCAGTGCTGA-ATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGGAAG 2662474
Query 14398 CGACAGCTTTTTTATACAT 14416
| |||||| || |||||
Sbjct 2662473 CCTGAGCTTTCTTGTACAT 2662455
>seq131
Length=9795181
Score = 114 bits (126), Expect = 1e-20
Identities = 99/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||||| ||||| || || |||||||| ||||| || ||||| ||||| |
Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611
Query 14014 CTA 14016
|||
Sbjct 9778612 CTA 9778614
Score = 96.9 bits (106), Expect = 3e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || ||||| | |||||||| | ||||| || |||||||||||||| || |||
Sbjct 9777471 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 9777530
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661
|||||||| ||||| ||||| || ||||||||||||
Sbjct 9777531 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 9777566
>seq58
Length=18876681
Score = 114 bits (126), Expect = 1e-20
Identities = 99/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634
Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013
| | ||| ||||||| ||||| || || |||||||| ||||| || ||||| ||||| |
Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574
Query 14014 CTA 14016
|||
Sbjct 18847573 CTA 18847571
Score = 96.9 bits (106), Expect = 3e-15
Identities = 79/96 (82%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13566 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCT 13625
|| || || ||||| | |||||||| | ||||| || |||||||||||||| || |||
Sbjct 18848714 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 18848655
Query 13626 TCCAGTGATATATTTTCCATAAAATCAAATGGATTT 13661
|||||||| ||||| ||||| || ||||||||||||
Sbjct 18848654 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 18848619
>seq201
Length=5903822
Score = 104 bits (114), Expect = 2e-17
Identities = 224/329 (68%), Gaps = 12/329 (4%)
Strand=Plus/Minus
Query 14094 ATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTACT-TGAAATGTATGTATC 14152
||||||||||| |||| ||| | | ||||||| || || ||| | | |||||| || ||
Sbjct 3664459 ATTGTTTCAATGGCATCAAAGACAAATTCCTTTTCCTT-GTAATCTTTAATGTAAGTGTC 3664401
Query 14153 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAA 14212
| || | |||| |||||||| | |||||| ||||| | || || || ||| | ||
Sbjct 3664400 ATTACAGATACTATGTATTTCAGAATATATGTTATCCATGGTAATTTGGAAGCCAAAGAA 3664341
Query 14213 GCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAAC 14272
|| ||||| | || ||| | ||||| || | || |||||||| ||
Sbjct 3664340 ACAGTGGGCTTCTGTAATCTGAGTTTCTTGGCTAAATCACTCCACTAAGTTTTCATTCAC 3664281
Query 14273 TATACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTT 14328
||| |||| || |||||||| || ||| ||||| | |||||||||| ||| |
Sbjct 3664280 TATGCCATTCCTTGCTGCAAAGAACACCAGTGCATATGAT----ATAAAGTATTTCTCCT 3664225
Query 14329 CATTGTTGAGTTTTTTCCAAT-CGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTC 14387
|| || || || | | | | || | |||| ||||||||| || || ||| |||
Sbjct 3664224 CAGGCTTCAGGGCTTCCTAGTGCTGA-ATGTCCTCAGAAAGATCCACCTCCTCAGTGGTC 3664166
Query 14388 CAAAAACTAGCGACAGCTTTTTTATACAT 14416
|||||| ||| ||||||| || |||||
Sbjct 3664165 CAAAAAGAAGCCTCAGCTTTCTTGTACAT 3664137
>seq27
Length=27113625
Score = 104 bits (114), Expect = 2e-17
Identities = 123/164 (75%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 13854 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13913
|| |||||||| |||| || ||||| ||||| || | ||||||||||| |||||||||
Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085
Query 13914 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG-C 13972
|| || ||||||| | | | ||||| ||| ||| || || | ||| || ||| |
Sbjct 23269086 TCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144
Query 13973 AAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTA 14016
||| || || |||||||| |||| || ||||| ||||| ||||
Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA 23269188
>seq1
Length=63721086
Score = 91.5 bits (100), Expect = 1e-13
Identities = 67/78 (86%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 13584 TGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13643
|||||||| ||||| |||||||||||| || ||||| ||||||| || |||||||||
Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832
Query 13644 ATAAAATCAAATGGATTT 13661
||||||||||| ||||||
Sbjct 1725833 ATAAAATCAAAGGGATTT 1725850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479605069700000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |