Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq260 255 6e-63 seq3 244 1e-59 seq205 232 6e-56 seq4595 212 6e-50 seq1663 203 3e-47 seq50 183 3e-41 seq131 109 5e-19 seq58 109 5e-19 seq27 100 3e-16 seq201 95.1 1e-14 seq1 82.4 7e-11 >seq260 Length=4071714 Score = 255 bits (282), Expect = 6e-63 Identities = 615/926 (66%), Gaps = 25/926 (3%) Strand=Plus/Minus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| || |||||| | ||||| || ||||| |||||||| || ||| Sbjct 1910055 GACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 1909996 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473 |||||||| ||||| ||||| || || ||||||||| | | |||| |||| | || Sbjct 1909995 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 1909936 Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533 || | ||| ||||| || || ||| || | |||||| ||| Sbjct 1909935 CCCAATTC--------------CAGCATTAGTCTGAATGTACCGCTTAATTAAAGTGCAA 1909890 Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593 || || | || || || ||||| | | | || | || || | |||||| ||| Sbjct 1909889 TTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACA 1909830 Query 13594 GCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAA 13653 | | | || || |||| | | | ||||| | | |||| ||| || Sbjct 1909829 GAATTAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAAC 1909770 Query 13654 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13713 |||| ||| ||| | |||| || | ||||||||||| ||||||||||| || | |||| Sbjct 1909769 ATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAAT 1909710 Query 13714 GTTAATCCTGGCATCAATCCTCGtttttttAA-CCAAAATATTGCAGCGAATGATCCGGA 13772 || | || ||||| | |||||| |||||| | ||| |||||| || || || | || Sbjct 1909709 GTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGA 1909650 Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 |||||| ||||| || | ||| ||||| |||| | || || || | |||| ||| Sbjct 1909649 AAAGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTT 1909590 Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892 || ||||| ||||| || | || || |||| | || || ||| | || Sbjct 1909589 GTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAAT 1909530 Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952 ||||| || | | |||| | | |||| | | |||||| || |||||||| | || Sbjct 1909529 GGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAGACT 1909470 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 |||||||||||| ||||||||||| || | || || || ||||| ||||| | ||||| Sbjct 1909469 ATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTC 1909410 Query 14013 TG-ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 || | ||| | || || | ||||| || ||||||||||||| || || |||||| Sbjct 1909409 TGTAACAT-GAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCAT 1909351 Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14131 | |||||||| ||||||| || || | || |||| | || ||| || | || Sbjct 1909350 TTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCCGGGCTT 1909291 Query 14132 TCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189 || | ||| || |||||||||||||| || || || || || ||||| ||| | Sbjct 1909290 CTCAGT--GCTGAATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAAGCCTC 1909233 Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTGA 14249 |||||| || ||||| | || || | ||| |||||||| | ||||| | || Sbjct 1909232 AGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAAGAAGACAAAGC--GA 1909175 Query 14250 AGATG--TTTCTTTAAGAATTGGCTC 14273 ||| | ||||| | || | ||| || Sbjct 1909174 AGAGGATTTTCTCTCAGCAATGGTTC 1909149 >seq3 Length=52730029 Score = 244 bits (270), Expect = 1e-59 Identities = 456/664 (69%), Gaps = 8/664 (1%) Strand=Plus/Plus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| || |||||||| | |||||||| ||| | |||||||| | ||| Sbjct 13968560 GACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCT 13968619 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473 |||||||| |||| ||||| || || ||||||||| | | |||| |||| | || Sbjct 13968620 TCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 13968679 Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533 || ||||| | | | ||| || || | ||| ||||| || ||||||| ||| Sbjct 13968680 CCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAA 13968739 Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593 ||||| || || | ||| ||||| | | ||| | ||| || | ||||| ||| Sbjct 13968740 TTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACA 13968799 Query 13594 GCCTCGTTTATAATAATCT-TAATAATGTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13650 || | | ||||| || | | || | || | ||||| | | || ||||| Sbjct 13968800 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 13968856 Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 || |||| || ||||| ||||| || | ||||||||||| |||||||| || || ||| Sbjct 13968857 AACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAA 13968916 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 ||||| | || ||||| ||||| || || | ||| ||||||| || ||||| || Sbjct 13968917 AATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCA 13968976 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 ||| |||| |||| || ||||| ||||| ||| | || || ||| | | |||| | Sbjct 13968977 GAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCT 13969036 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 |||| |||| ||||| || | ||| | || | | || ||| |||| Sbjct 13969037 TTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCA 13969096 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950 || ||||| || | | |||| | || |||| |||| |||||| || |||||||| | Sbjct 13969097 ATGGCATTAAAGAGAAATTCCCTGTCCTTAG-ACTT-TAATGTAAGTGTCAATAAGGAGA 13969154 Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010 |||||||||||||| ||||||||||| || || || || || ||||| ||||| ||| Sbjct 13969155 CTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACAGTGGGCT 13969214 Query 14011 TCTG 14014 |||| Sbjct 13969215 TCTG 13969218 >seq205 Length=6054944 Score = 232 bits (256), Expect = 6e-56 Identities = 496/738 (67%), Gaps = 21/738 (3%) Strand=Plus/Plus Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416 || || |||||| | ||||||||||| ||||| || ||| | |||||| | || |||||| Sbjct 2460976 ATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTCC 2461035 Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCT 13476 ||||| ||||| ||||| || || |||||| || | | ||||| | | | |||| Sbjct 2461036 AGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCC 2461095 Query 13477 AGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13536 ||||| | | || ||| || || | || ||||| || | ||||||| |||||| Sbjct 2461096 AGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTC 2461155 Query 13537 ATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCC 13596 || || || || || ||||| | | ||| | || || | |||||| ||||| Sbjct 2461156 ATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCA 2461215 Query 13597 TCGTTTATAATAATCT-TAATAATGTCA----TTAGAAGGAGGATATTTTAGA---TGTT 13648 | | ||||| || | | || | || ||| ||| | || |||| |||| Sbjct 2461216 T---TAATAATTATTTCTTTTACTCTCTGCTCTTA-----AGGTTTTTGTAGAAGGTGTT 2461267 Query 13649 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13708 | || ||| || ||||| ||||| || | ||||||||||| || | |||||| || | Sbjct 2461268 TGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGG 2461327 Query 13709 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 13768 ||||||| | || ||| || | | || || | ||| || |||| | || || Sbjct 2461328 AAAATGTCAGACCAGGCTTC-----TTGCTTCTTGAGCCAGAACATTGATACAAAAGAAT 2461382 Query 13769 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTT 13828 | |||||||| | ||| || |||| ||||| |||| | | |||||| | | |||| Sbjct 2461383 CAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTT 2461442 Query 13829 TTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888 ||||| ||||| | ||||| || | || || || ||| || || |||| Sbjct 2461443 CTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTT 2461502 Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948 | || |||| || ||| |||| | || |||| | | | |||| || ||||||| | Sbjct 2461503 CAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGA 2461562 Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008 |||||||||||||| || ||| |||| || || || || || ||||| ||||| | Sbjct 2461563 GACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGA 2461622 Query 14009 CTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068 |||||| || || | | |||| || ||||||||||||| || || |||| Sbjct 2461623 CTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCAT 2461682 Query 14069 CACTAGCTGCAAAAAATG 14086 |||| |||||||| |||| Sbjct 2461683 CACTTGCTGCAAAGAATG 2461700 >seq4595 Length=7281 Score = 212 bits (234), Expect = 6e-50 Identities = 565/847 (67%), Gaps = 26/847 (3%) Strand=Plus/Minus Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCA 13470 ||||| |||| ||||| ||||| || || ||| ||||| | | ||||| |||| | Sbjct 6856 CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTGAACACCTTATTA 6797 Query 13471 CAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCA 13530 |||| ||||| | | || ||||| || || || |||||||| | ||||||| Sbjct 6796 AAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGCTTCATTAAAGTG 6737 Query 13531 CAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGAC 13590 ||||||| || || || || ||||| | | ||| | || || | |||||| Sbjct 6736 CAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCCTGTTCTATCCTA 6677 Query 13591 ACAGCCTCGTTTATAATAATCT-TAATAATGTCA-TTAGAAGGAGGATATTTTAGA---T 13645 | || | | | ||| || | | || | || || || ||| | | ||| | Sbjct 6676 ATAGTAT---TAACAATTATTTCTTTTACTCTCTGTTCCAA--AGGTTTGTGTAGCAGGT 6622 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 |||| || | || || |||| ||||| || | |||||| |||| ||||||||||| | Sbjct 6621 GTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCAT 6562 Query 13706 TTG-AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764 ||| ||||||| | || ||||| | | ||| ||| || | ||| ||||||| || || Sbjct 6561 TTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAA 6502 Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824 || || |||||||| ||||| || ||||| ||||| |||| | | || ||| | | Sbjct 6501 GAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTCCCCATAGGTA 6442 Query 13825 GCTTTTTTGTTTGATATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCAT 13883 || ||||| | ||||| | || |||| || | || || || | | || ||| Sbjct 6441 ATTTCTTTGTCTCCAATCCAGCG-CAAGACCCAATCTGCCTTCTTCTTCACACAAGGCAT 6383 Query 13884 TGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTA-CTTGAAATGTATGTATCAA 13942 |||| || ||||| || | | |||| | || |||| | ||| || | || |||| Sbjct 6382 CATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATCA-GTGTCAA 6324 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 |||| | |||||||||||||| ||||||||||| || | || || || ||||| |||| Sbjct 6323 TAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAAC 6264 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | || ||||||| ||| || || | |||| || | ||||||| ||| || | Sbjct 6263 AGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACTA 6204 Query 14063 TACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTTCA 14118 | |||||||| ||||| || ||||||| | |||| | | |||||| || ||| Sbjct 6203 TGCCATCACTTGCTGC-AAGAATGCCACAGTACATGTGAT--GTGAAGTATCTCTTCTCA 6147 Query 14119 TTGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCC 14176 | || ||| ||| | ||| || ||| || ||||||| || | ||| | ||| Sbjct 6146 GGCTCCAGGGTTTCCCAGT--GCTGAATGTCCGTAAAAAGATCCACCTTCTCAGCGATCC 6089 Query 14177 AAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAA 14236 |||| ||| ||||||| || ||||| ||| || || | ||| ||| |||| | Sbjct 6088 AAAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAGAAAGA 6029 Query 14237 CTACAAA 14243 ||||| Sbjct 6028 TGACAAA 6022 >seq1663 Length=17039 Score = 203 bits (224), Expect = 3e-47 Identities = 492/742 (66%), Gaps = 21/742 (3%) Strand=Plus/Minus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || |||||||| |||||||| | ||| | ||| | |||||||| || ||| Sbjct 3198 GACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCT 3139 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473 | |||||| | ||| ||||| || || ||||||||| | |||||| |||| | || Sbjct 3138 TTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAA 3079 Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533 || ||||| | | || ||| || || | || ||||| || | ||||||| ||| Sbjct 3078 CCCAGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAA 3019 Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593 ||||| || || | || ||||| | | || || || | | |||||| ||| Sbjct 3018 TTCATTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTATCCCAACA 2960 Query 13594 GCCTCGTTTATAATAATCT-TAATAATGTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13650 || | | ||||| || | | || | || | ||||| | | || ||||| Sbjct 2959 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 2903 Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710 || ||| ||| ||||| ||||| || | ||||||||||| ||||||||||| || ||| Sbjct 2902 AACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 2843 Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770 ||||| | || ||||| | |||| | || | | ||| | || || || || || || Sbjct 2842 AATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCA 2783 Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830 ||||||| ||||| || ||||| ||||| | | || | | |||| | Sbjct 2782 GAAAAGACGATTCCTTCCACTGCTGCAAAGG-------------TACATAGGTAGCTTCT 2736 Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890 |||| || || ||||| || | || || || | | || || ||| Sbjct 2735 TTGTCCCTAATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAA 2676 Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950 || ||||| || | | |||| | || |||| | | |||||| || |||||||| | Sbjct 2675 ATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGA 2616 Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010 |||||||||||||| ||||||||||| || || || || || ||||| ||||| | | | Sbjct 2615 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGT 2557 Query 14011 TCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070 |||| ||| || | | ||||| || |||| |||||||| || || ||||| Sbjct 2556 TCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCA 2497 Query 14071 CTAGCTGCAAAAAATGCCAATA 14092 || || || || || |||| || Sbjct 2496 CTTGCCGCTAAGAACGCCAGTA 2475 >seq50 Length=19932738 Score = 183 bits (202), Expect = 3e-41 Identities = 561/860 (65%), Gaps = 37/860 (4%) Strand=Plus/Minus Query 13360 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAA-GTTAGTTTTACCTTCCAG 13418 || |||||| | ||| |||| | ||| || |||||||| |||||| || |||||||| Sbjct 2663292 ACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAG 2663233 Query 13419 TGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAG 13478 ||| ||||| ||||| || || ||||||||| | | || || || | | |||| || Sbjct 2663232 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAG 2663173 Query 13479 TTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCAT 13538 ||| | | || ||| || || | || ||||| || | ||||||| |||||||| Sbjct 2663172 TTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCAT 2663113 Query 13539 ACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTC 13598 || || || || ||||| | | | ||| | || | | |||||| ||||| | Sbjct 2663112 TCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT- 2663054 Query 13599 GTTTATAATAATCTTAATAA---TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13655 | | ||| || | ||| | | | |||| | | || ||||| |||| Sbjct 2663053 --TAACAATTATTTCTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAG 2662996 Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715 |||||||| |||||||||| ||||||| ||| || |||||||| Sbjct 2662995 G---CACGCAAAG-------------CCTCATCTCTGCTAATAATTTCATTGGAAAATGT 2662952 Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC-CGGAAA 13774 | || ||||| | |||| || || | | || |||| || || | | |||| Sbjct 2662951 GAGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAA 2662892 Query 13775 AGAATATTCCCTCAACTGCA--GCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832 |||| | ||| || |||| ||||| || | | || || | | ||||| ||| Sbjct 2662891 AGAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTT 2662832 Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892 || |||| ||||| || ||||| || || | | || ||||||||| || Sbjct 2662831 GTCCCTAGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAAT 2662772 Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952 || |||| | | ||| | || ||| | | ||| || || |||||||| | || Sbjct 2662771 GCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACT 2662712 Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012 |||||||| ||| |||||| ||| || || || || || |||| ||||| | ||||| Sbjct 2662711 ATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTC 2662652 Query 14013 TGACCAT-TGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071 | | || || || || | ||||| || ||||||||||||| || || ||||||| Sbjct 2662651 T-ATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCAC 2662593 Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14131 | |||||||| ||||||| || | | ||| | | || ||| ||| || || ||| Sbjct 2662592 TTGCTGCAAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAGTTT 2662533 Query 14132 TCCAATCGGCTAAA--TCCTTAGAAAGA-----TCTACTTCATCAACTGTCCAAAAACTA 14184 ||| | ||| || ||||||| |||| || || || ||| |||||||||| | Sbjct 2662532 CCCAGT--GCTGAATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGGAA 2662475 Query 14185 GCGACAGCTTTTTTATACAT 14204 || |||||| || ||||| Sbjct 2662474 GCCTGAGCTTTCTTGTACAT 2662455 >seq131 Length=9795181 Score = 109 bits (120), Expect = 5e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || | Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| | Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611 Query 13802 CTA 13804 ||| Sbjct 9778612 CTA 9778614 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| | |||||||| | ||||| || ||||| |||||||| || ||| Sbjct 9777471 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 9777530 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449 |||||||| ||||| ||||| || || ||||||||| Sbjct 9777531 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 9777566 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 |||||| || |||||||| | |||||||||||||| ||||||||||| || || || || Sbjct 9781141 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 9781200 Query 13989 AAAACCATAAAAACATCTAGCTTCTG 14014 || ||||| ||||| | ||||||| Sbjct 9781201 GAAGCCATAGAAACAGCGGGCTTCTG 9781226 >seq58 Length=18876681 Score = 109 bits (120), Expect = 5e-19 Identities = 98/123 (80%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 |||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || | Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| | Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574 Query 13802 CTA 13804 ||| Sbjct 18847573 CTA 18847571 Score = 87.8 bits (96), Expect = 2e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413 || || || ||||| | |||||||| | ||||| || ||||| |||||||| || ||| Sbjct 18848714 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 18848655 Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449 |||||||| ||||| ||||| || || ||||||||| Sbjct 18848654 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 18848619 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988 |||||| || |||||||| | |||||||||||||| ||||||||||| || || || || Sbjct 18845044 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 18844985 Query 13989 AAAACCATAAAAACATCTAGCTTCTG 14014 || ||||| ||||| | ||||||| Sbjct 18844984 GAAGCCATAGAAACAGCGGGCTTCTG 18844959 >seq27 Length=27113625 Score = 100 bits (110), Expect = 3e-16 Identities = 122/164 (74%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701 || |||||||| |||| || ||||| ||||| || | ||||||||||| ||||||||| Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085 Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG-C 13760 || || ||||||| | | | ||||| ||| ||| || || | ||| || ||| | Sbjct 23269086 TCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144 Query 13761 GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTA 13804 || || || |||||||| |||| || ||||| ||||| |||| Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA 23269188 >seq201 Length=5903822 Score = 95.1 bits (104), Expect = 1e-14 Identities = 222/330 (67%), Gaps = 14/330 (4%) Strand=Plus/Minus Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACT-TGAAATGTATGTATC 13940 |||||||| || |||| || | | |||||| || || ||| | | |||||| || || Sbjct 3664459 ATTGTTTCAATGGCATCAAAGACAAATTCCTTTTCCTT-GTAATCTTTAATGTAAGTGTC 3664401 Query 13941 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000 | || | |||| |||||||| | |||||| || || | || || || ||| | || Sbjct 3664400 ATTACAGATACTATGTATTTCAGAATATATGTTATCCATGGTAATTTGGAAGCCAAAGAA 3664341 Query 14001 ACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060 ||| ||||||| || || | ||||| || | ||||||||||| || Sbjct 3664340 ACAGTGGGCTTCTGTAATCTGAGTTTCTTGGCTAAATCACTCCACTAAGTTTTCATTCAC 3664281 Query 14061 AATACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTT 14116 || |||| || |||||||| || ||| ||||| | |||||||||| ||| | Sbjct 3664280 TATGCCATTCCTTGCTGCAAAGAACACCAGTGCATATGAT----ATAAAGTATTTCTCCT 3664225 Query 14117 CATTGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGT 14174 || || || || | | | ||| || |||| ||||||||| || || ||| || Sbjct 3664224 CAGGCTTCAGGGCTTCCTAGT--GCTGAATGTCCTCAGAAAGATCCACCTCCTCAGTGGT 3664167 Query 14175 CCAAAAACTAGCGACAGCTTTTTTATACAT 14204 ||||||| ||| ||||||| || ||||| Sbjct 3664166 CCAAAAAGAAGCCTCAGCTTTCTTGTACAT 3664137 >seq1 Length=63721086 Score = 82.4 bits (90), Expect = 7e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 13372 TGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13431 |||||||| ||||| ||||||||| || || ||||| ||||||| || ||||||||| Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832 Query 13432 ATAAAATCGAATGGATTT 13449 |||||||| || |||||| Sbjct 1725833 ATAAAATCAAAGGGATTT 1725850 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478466161620000