Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq260 255 6e-63
seq3 244 1e-59
seq205 232 6e-56
seq4595 212 6e-50
seq1663 203 3e-47
seq50 183 3e-41
seq131 109 5e-19
seq58 109 5e-19
seq27 100 3e-16
seq201 95.1 1e-14
seq1 82.4 7e-11
>seq260
Length=4071714
Score = 255 bits (282), Expect = 6e-63
Identities = 615/926 (66%), Gaps = 25/926 (3%)
Strand=Plus/Minus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| || |||||| | ||||| || ||||| |||||||| || |||
Sbjct 1910055 GACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 1909996
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473
|||||||| ||||| ||||| || || ||||||||| | | |||| |||| | ||
Sbjct 1909995 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 1909936
Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533
|| | ||| ||||| || || ||| || | |||||| |||
Sbjct 1909935 CCCAATTC--------------CAGCATTAGTCTGAATGTACCGCTTAATTAAAGTGCAA 1909890
Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593
|| || | || || || ||||| | | | || | || || | |||||| |||
Sbjct 1909889 TTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACA 1909830
Query 13594 GCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGATGTTTAAAA 13653
| | | || || |||| | | | ||||| | | |||| ||| ||
Sbjct 1909829 GAATTAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAAC 1909770
Query 13654 ATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAAT 13713
|||| ||| ||| | |||| || | ||||||||||| ||||||||||| || | ||||
Sbjct 1909769 ATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAAT 1909710
Query 13714 GTTAATCCTGGCATCAATCCTCGtttttttAA-CCAAAATATTGCAGCGAATGATCCGGA 13772
|| | || ||||| | |||||| |||||| | ||| |||||| || || || | ||
Sbjct 1909709 GTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGA 1909650
Query 13773 AAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832
|||||| ||||| || | ||| ||||| |||| | || || || | |||| |||
Sbjct 1909649 AAAGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTT 1909590
Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892
|| ||||| ||||| || | || || |||| | || || ||| | ||
Sbjct 1909589 GTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAAT 1909530
Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952
||||| || | | |||| | | |||| | | |||||| || |||||||| | ||
Sbjct 1909529 GGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAGACT 1909470
Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012
|||||||||||| ||||||||||| || | || || || ||||| ||||| | |||||
Sbjct 1909469 ATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTC 1909410
Query 14013 TG-ACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
|| | ||| | || || | ||||| || ||||||||||||| || || ||||||
Sbjct 1909409 TGTAACAT-GAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCAT 1909351
Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14131
| |||||||| ||||||| || || | || |||| | || ||| || | ||
Sbjct 1909350 TTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCCGGGCTT 1909291
Query 14132 TCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGAC 14189
|| | ||| || |||||||||||||| || || || || || ||||| ||| |
Sbjct 1909290 CTCAGT--GCTGAATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAAGCCTC 1909233
Query 14190 AGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAATCTTGA 14249
|||||| || ||||| | || || | ||| |||||||| | ||||| | ||
Sbjct 1909232 AGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAAGAAGACAAAGC--GA 1909175
Query 14250 AGATG--TTTCTTTAAGAATTGGCTC 14273
||| | ||||| | || | ||| ||
Sbjct 1909174 AGAGGATTTTCTCTCAGCAATGGTTC 1909149
>seq3
Length=52730029
Score = 244 bits (270), Expect = 1e-59
Identities = 456/664 (69%), Gaps = 8/664 (1%)
Strand=Plus/Plus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| || |||||||| | |||||||| ||| | |||||||| | |||
Sbjct 13968560 GACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCT 13968619
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473
|||||||| |||| ||||| || || ||||||||| | | |||| |||| | ||
Sbjct 13968620 TCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAA 13968679
Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533
|| ||||| | | | ||| || || | ||| ||||| || ||||||| |||
Sbjct 13968680 CCCAGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAA 13968739
Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593
||||| || || | ||| ||||| | | ||| | ||| || | ||||| |||
Sbjct 13968740 TTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACA 13968799
Query 13594 GCCTCGTTTATAATAATCT-TAATAATGTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13650
|| | | ||||| || | | || | || | ||||| | | || |||||
Sbjct 13968800 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 13968856
Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710
|| |||| || ||||| ||||| || | ||||||||||| |||||||| || || |||
Sbjct 13968857 AACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAA 13968916
Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770
||||| | || ||||| ||||| || || | ||| ||||||| || ||||| ||
Sbjct 13968917 AATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCA 13968976
Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830
||| |||| |||| || ||||| ||||| ||| | || || ||| | | |||| |
Sbjct 13968977 GAATAGAAGATTCTTTCCACTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCT 13969036
Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890
|||| |||| ||||| || | ||| | || | | || ||| ||||
Sbjct 13969037 TTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCA 13969096
Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950
|| ||||| || | | |||| | || |||| |||| |||||| || |||||||| |
Sbjct 13969097 ATGGCATTAAAGAGAAATTCCCTGTCCTTAG-ACTT-TAATGTAAGTGTCAATAAGGAGA 13969154
Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010
|||||||||||||| ||||||||||| || || || || || ||||| ||||| |||
Sbjct 13969155 CTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACAGTGGGCT 13969214
Query 14011 TCTG 14014
||||
Sbjct 13969215 TCTG 13969218
>seq205
Length=6054944
Score = 232 bits (256), Expect = 6e-56
Identities = 496/738 (67%), Gaps = 21/738 (3%)
Strand=Plus/Plus
Query 13357 ATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCC 13416
|| || |||||| | ||||||||||| ||||| || ||| | |||||| | || ||||||
Sbjct 2460976 ATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTCC 2461035
Query 13417 AGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCT 13476
||||| ||||| ||||| || || |||||| || | | ||||| | | | ||||
Sbjct 2461036 AGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACCC 2461095
Query 13477 AGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTC 13536
||||| | | || ||| || || | || ||||| || | ||||||| ||||||
Sbjct 2461096 AGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATTC 2461155
Query 13537 ATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCC 13596
|| || || || || ||||| | | ||| | || || | |||||| |||||
Sbjct 2461156 ATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGCA 2461215
Query 13597 TCGTTTATAATAATCT-TAATAATGTCA----TTAGAAGGAGGATATTTTAGA---TGTT 13648
| | ||||| || | | || | || ||| ||| | || |||| ||||
Sbjct 2461216 T---TAATAATTATTTCTTTTACTCTCTGCTCTTA-----AGGTTTTTGTAGAAGGTGTT 2461267
Query 13649 TAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTG 13708
| || ||| || ||||| ||||| || | ||||||||||| || | |||||| || |
Sbjct 2461268 TGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGG 2461327
Query 13709 AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC 13768
||||||| | || ||| || | | || || | ||| || |||| | || ||
Sbjct 2461328 AAAATGTCAGACCAGGCTTC-----TTGCTTCTTGAGCCAGAACATTGATACAAAAGAAT 2461382
Query 13769 CGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTT 13828
| |||||||| | ||| || |||| ||||| |||| | | |||||| | | ||||
Sbjct 2461383 CAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTT 2461442
Query 13829 TTTTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTT 13888
||||| ||||| | ||||| || | || || || ||| || || ||||
Sbjct 2461443 CTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTT 2461502
Query 13889 CGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTA 13948
| || |||| || ||| |||| | || |||| | | | |||| || ||||||| |
Sbjct 2461503 CAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGA 2461562
Query 13949 AGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAG 14008
|||||||||||||| || ||| |||| || || || || || ||||| ||||| |
Sbjct 2461563 GACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGA 2461622
Query 14009 CTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCAT 14068
|||||| || || | | |||| || ||||||||||||| || || ||||
Sbjct 2461623 CTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCAT 2461682
Query 14069 CACTAGCTGCAAAAAATG 14086
|||| |||||||| ||||
Sbjct 2461683 CACTTGCTGCAAAGAATG 2461700
>seq4595
Length=7281
Score = 212 bits (234), Expect = 6e-50
Identities = 565/847 (67%), Gaps = 26/847 (3%)
Strand=Plus/Minus
Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCA 13470
||||| |||| ||||| ||||| || || ||| ||||| | | ||||| |||| |
Sbjct 6856 CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTGAACACCTTATTA 6797
Query 13471 CAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCA 13530
|||| ||||| | | || ||||| || || || |||||||| | |||||||
Sbjct 6796 AAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGCTTCATTAAAGTG 6737
Query 13531 CAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGAC 13590
||||||| || || || || ||||| | | ||| | || || | ||||||
Sbjct 6736 CAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCCTGTTCTATCCTA 6677
Query 13591 ACAGCCTCGTTTATAATAATCT-TAATAATGTCA-TTAGAAGGAGGATATTTTAGA---T 13645
| || | | | ||| || | | || | || || || ||| | | ||| |
Sbjct 6676 ATAGTAT---TAACAATTATTTCTTTTACTCTCTGTTCCAA--AGGTTTGTGTAGCAGGT 6622
Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705
|||| || | || || |||| ||||| || | |||||| |||| ||||||||||| |
Sbjct 6621 GTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCAT 6562
Query 13706 TTG-AAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAAT 13764
||| ||||||| | || ||||| | | ||| ||| || | ||| ||||||| || ||
Sbjct 6561 TTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAA 6502
Query 13765 GATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGAT 13824
|| || |||||||| ||||| || ||||| ||||| |||| | | || ||| | |
Sbjct 6501 GAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTCCCCATAGGTA 6442
Query 13825 GCTTTTTTGTTTGATATCCATTTTCTAG-CCCATTCAGAtttttttttAATAAAATCCAT 13883
|| ||||| | ||||| | || |||| || | || || || | | || |||
Sbjct 6441 ATTTCTTTGTCTCCAATCCAGCG-CAAGACCCAATCTGCCTTCTTCTTCACACAAGGCAT 6383
Query 13884 TGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTA-CTTGAAATGTATGTATCAA 13942
|||| || ||||| || | | |||| | || |||| | ||| || | || ||||
Sbjct 6382 CATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATCA-GTGTCAA 6324
Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002
|||| | |||||||||||||| ||||||||||| || | || || || ||||| ||||
Sbjct 6323 TAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAAC 6264
Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062
| || ||||||| ||| || || | |||| || | ||||||| ||| || |
Sbjct 6263 AGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACTA 6204
Query 14063 TACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTTCA 14118
| |||||||| ||||| || ||||||| | |||| | | |||||| || |||
Sbjct 6203 TGCCATCACTTGCTGC-AAGAATGCCACAGTACATGTGAT--GTGAAGTATCTCTTCTCA 6147
Query 14119 TTGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGTCC 14176
| || ||| ||| | ||| || ||| || ||||||| || | ||| | |||
Sbjct 6146 GGCTCCAGGGTTTCCCAGT--GCTGAATGTCCGTAAAAAGATCCACCTTCTCAGCGATCC 6089
Query 14177 AAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAA 14236
|||| ||| ||||||| || ||||| ||| || || | ||| ||| |||| |
Sbjct 6088 AAAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAGAAAGA 6029
Query 14237 CTACAAA 14243
|||||
Sbjct 6028 TGACAAA 6022
>seq1663
Length=17039
Score = 203 bits (224), Expect = 3e-47
Identities = 492/742 (66%), Gaps = 21/742 (3%)
Strand=Plus/Minus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || |||||||| |||||||| | ||| | ||| | |||||||| || |||
Sbjct 3198 GACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCT 3139
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAA 13473
| |||||| | ||| ||||| || || ||||||||| | |||||| |||| | ||
Sbjct 3138 TTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAA 3079
Query 13474 CCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAA 13533
|| ||||| | | || ||| || || | || ||||| || | ||||||| |||
Sbjct 3078 CCCAGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAA 3019
Query 13534 TTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACA 13593
||||| || || | || ||||| | | || || || | | |||||| |||
Sbjct 3018 TTCATTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTATCCCAACA 2960
Query 13594 GCCTCGTTTATAATAATCT-TAATAATGTCA--TTAGAAGGAGGATATTTTAGATGTTTA 13650
|| | | ||||| || | | || | || | ||||| | | || |||||
Sbjct 2959 GCAT---TAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTG 2903
Query 13651 AAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAA 13710
|| ||| ||| ||||| ||||| || | ||||||||||| ||||||||||| || |||
Sbjct 2902 AACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAA 2843
Query 13711 AATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCG 13770
||||| | || ||||| | |||| | || | | ||| | || || || || || ||
Sbjct 2842 AATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCA 2783
Query 13771 GAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTT 13830
||||||| ||||| || ||||| ||||| | | || | | |||| |
Sbjct 2782 GAAAAGACGATTCCTTCCACTGCTGCAAAGG-------------TACATAGGTAGCTTCT 2736
Query 13831 TTGTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCG 13890
|||| || || ||||| || | || || || | | || || |||
Sbjct 2735 TTGTCCCTAATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAA 2676
Query 13891 ATTGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAG 13950
|| ||||| || | | |||| | || |||| | | |||||| || |||||||| |
Sbjct 2675 ATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGA 2616
Query 13951 CTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCT 14010
|||||||||||||| ||||||||||| || || || || || ||||| ||||| | | |
Sbjct 2615 CTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGT 2557
Query 14011 TCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCA 14070
|||| ||| || | | ||||| || |||| |||||||| || || |||||
Sbjct 2556 TCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCA 2497
Query 14071 CTAGCTGCAAAAAATGCCAATA 14092
|| || || || || |||| ||
Sbjct 2496 CTTGCCGCTAAGAACGCCAGTA 2475
>seq50
Length=19932738
Score = 183 bits (202), Expect = 3e-41
Identities = 561/860 (65%), Gaps = 37/860 (4%)
Strand=Plus/Minus
Query 13360 ACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAA-GTTAGTTTTACCTTCCAG 13418
|| |||||| | ||| |||| | ||| || |||||||| |||||| || ||||||||
Sbjct 2663292 ACTCCCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAG 2663233
Query 13419 TGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAAACACTTTATCACAACCTAG 13478
||| ||||| ||||| || || ||||||||| | | || || || | | |||| ||
Sbjct 2663232 TGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAG 2663173
Query 13479 TTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATCACAATTCAT 13538
||| | | || ||| || || | || ||||| || | ||||||| ||||||||
Sbjct 2663172 TTCCAGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCAT 2663113
Query 13539 ACCTATTAGTTTTACAGGAATTATATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTC 13598
|| || || || ||||| | | | ||| | || | | |||||| ||||| |
Sbjct 2663112 TCCGATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT- 2663054
Query 13599 GTTTATAATAATCTTAATAA---TGTCATTAGAAGGAGGATATTTTAGATGTTTAAAAAT 13655
| | ||| || | ||| | | | |||| | | || ||||| ||||
Sbjct 2663053 --TAACAATTATTTCTTTAACTCTCTGCTCCAAAGGTTTGTGTAGCAGGTGTTTGAAAAG 2662996
Query 13656 TAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGT 13715
|||||||| |||||||||| ||||||| ||| || ||||||||
Sbjct 2662995 G---CACGCAAAG-------------CCTCATCTCTGCTAATAATTTCATTGGAAAATGT 2662952
Query 13716 TAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATC-CGGAAA 13774
| || ||||| | |||| || || | | || |||| || || | | ||||
Sbjct 2662951 GAGGCCAGGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAA 2662892
Query 13775 AGAATATTCCCTCAACTGCA--GCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTT 13832
|||| | ||| || |||| ||||| || | | || || | | ||||| |||
Sbjct 2662891 AGAAGACTCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTT 2662832
Query 13833 GTTTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGAT 13892
|| |||| ||||| || ||||| || || | | || ||||||||| ||
Sbjct 2662831 GTCCCTAGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAAT 2662772
Query 13893 TGCATTGAATAAATGTTCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCT 13952
|| |||| | | ||| | || ||| | | ||| || || |||||||| | ||
Sbjct 2662771 GCCACTGAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACT 2662712
Query 13953 ATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACATCTAGCTTC 14012
|||||||| ||| |||||| ||| || || || || || |||| ||||| | |||||
Sbjct 2662711 ATACATTTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTC 2662652
Query 14013 TGACCAT-TGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAATACCATCAC 14071
| | || || || || | ||||| || ||||||||||||| || || |||||||
Sbjct 2662651 T-ATAATCTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCAC 2662593
Query 14072 TAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGTTGAGTTTTT 14131
| |||||||| ||||||| || | | ||| | | || ||| ||| || || |||
Sbjct 2662592 TTGCTGCAAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAGTTT 2662533
Query 14132 TCCAATCGGCTAAA--TCCTTAGAAAGA-----TCTACTTCATCAACTGTCCAAAAACTA 14184
||| | ||| || ||||||| |||| || || || ||| |||||||||| |
Sbjct 2662532 CCCAGT--GCTGAATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGGAA 2662475
Query 14185 GCGACAGCTTTTTTATACAT 14204
|| |||||| || |||||
Sbjct 2662474 GCCTGAGCTTTCTTGTACAT 2662455
>seq131
Length=9795181
Score = 109 bits (120), Expect = 5e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611
Query 13802 CTA 13804
|||
Sbjct 9778612 CTA 9778614
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| | |||||||| | ||||| || ||||| |||||||| || |||
Sbjct 9777471 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 9777530
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449
|||||||| ||||| ||||| || || |||||||||
Sbjct 9777531 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 9777566
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988
|||||| || |||||||| | |||||||||||||| ||||||||||| || || || ||
Sbjct 9781141 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 9781200
Query 13989 AAAACCATAAAAACATCTAGCTTCTG 14014
|| ||||| ||||| | |||||||
Sbjct 9781201 GAAGCCATAGAAACAGCGGGCTTCTG 9781226
>seq58
Length=18876681
Score = 109 bits (120), Expect = 5e-19
Identities = 98/123 (80%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741
|||||||||| ||||||||||| || |||||||| | || ||||| | |||||| || |
Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634
Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801
| | ||| ||||||| || || || || |||||||| ||||| || ||||| ||||| |
Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574
Query 13802 CTA 13804
|||
Sbjct 18847573 CTA 18847571
Score = 87.8 bits (96), Expect = 2e-12
Identities = 77/96 (80%), Gaps = 0/96 (0%)
Strand=Plus/Minus
Query 13354 GAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCT 13413
|| || || ||||| | |||||||| | ||||| || ||||| |||||||| || |||
Sbjct 18848714 GACATCACTCCCATCCTCTGATATTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCT 18848655
Query 13414 TCCAGTGATATATTTTCCATAAAATCGAATGGATTT 13449
|||||||| ||||| ||||| || || |||||||||
Sbjct 18848654 TCCAGTGAAATATTCTCCATGAAGTCAAATGGATTT 18848619
Score = 84.2 bits (92), Expect = 2e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 13929 AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTG 13988
|||||| || |||||||| | |||||||||||||| ||||||||||| || || || ||
Sbjct 18845044 AATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTG 18844985
Query 13989 AAAACCATAAAAACATCTAGCTTCTG 14014
|| ||||| ||||| | |||||||
Sbjct 18844984 GAAGCCATAGAAACAGCGGGCTTCTG 18844959
>seq27
Length=27113625
Score = 100 bits (110), Expect = 3e-16
Identities = 122/164 (74%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 13642 AGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGT 13701
|| |||||||| |||| || ||||| ||||| || | ||||||||||| |||||||||
Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085
Query 13702 TCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAG-C 13760
|| || ||||||| | | | ||||| ||| ||| || || | ||| || ||| |
Sbjct 23269086 TCATTGGAAAATG-TGAGACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144
Query 13761 GAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTA 13804
|| || || |||||||| |||| || ||||| ||||| ||||
Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA 23269188
>seq201
Length=5903822
Score = 95.1 bits (104), Expect = 1e-14
Identities = 222/330 (67%), Gaps = 14/330 (4%)
Strand=Plus/Minus
Query 13882 ATTGTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAGTACT-TGAAATGTATGTATC 13940
|||||||| || |||| || | | |||||| || || ||| | | |||||| || ||
Sbjct 3664459 ATTGTTTCAATGGCATCAAAGACAAATTCCTTTTCCTT-GTAATCTTTAATGTAAGTGTC 3664401
Query 13941 AATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAA 14000
| || | |||| |||||||| | |||||| || || | || || || ||| | ||
Sbjct 3664400 ATTACAGATACTATGTATTTCAGAATATATGTTATCCATGGTAATTTGGAAGCCAAAGAA 3664341
Query 14001 ACATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAAC 14060
||| ||||||| || || | ||||| || | ||||||||||| ||
Sbjct 3664340 ACAGTGGGCTTCTGTAATCTGAGTTTCTTGGCTAAATCACTCCACTAAGTTTTCATTCAC 3664281
Query 14061 AATACCATCACTAGCTGCAAAAAATGCCA----ATATGTTTTTAATAAAGTATTGCTCTT 14116
|| |||| || |||||||| || ||| ||||| | |||||||||| ||| |
Sbjct 3664280 TATGCCATTCCTTGCTGCAAAGAACACCAGTGCATATGAT----ATAAAGTATTTCTCCT 3664225
Query 14117 CATTGTTGAGTTTTTTCCAATCGGCTAAA--TCCTTAGAAAGATCTACTTCATCAACTGT 14174
|| || || || | | | ||| || |||| ||||||||| || || ||| ||
Sbjct 3664224 CAGGCTTCAGGGCTTCCTAGT--GCTGAATGTCCTCAGAAAGATCCACCTCCTCAGTGGT 3664167
Query 14175 CCAAAAACTAGCGACAGCTTTTTTATACAT 14204
||||||| ||| ||||||| || |||||
Sbjct 3664166 CCAAAAAGAAGCCTCAGCTTTCTTGTACAT 3664137
>seq1
Length=63721086
Score = 82.4 bits (90), Expect = 7e-11
Identities = 65/78 (83%), Gaps = 0/78 (0%)
Strand=Plus/Plus
Query 13372 TGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCC 13431
|||||||| ||||| ||||||||| || || ||||| ||||||| || |||||||||
Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832
Query 13432 ATAAAATCGAATGGATTT 13449
|||||||| || ||||||
Sbjct 1725833 ATAAAATCAAAGGGATTT 1725850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478466161620000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |