Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq260 343 2e-89 seq1663 336 3e-87 seq4595 325 5e-84 seq205 311 1e-79 seq3 306 5e-78 seq50 282 6e-71 seq131 129 8e-25 seq58 129 8e-25 seq140 123 3e-23 seq27 122 1e-22 seq1 120 4e-22 >seq260 Length=4071714 Score = 343 bits (380), Expect = 2e-89 Identities = 648/949 (68%), Gaps = 23/949 (2%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| || ||||| |||||||| | Sbjct 1910099 TTTAGAAGTCATCATCGAAGGTAAAAGAATTCTCTGAAGGACCTGACATGACTCCCATCT 1910040 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || ||| || || | || || || || |||||||| ||||||| ||| ||||| | Sbjct 1910039 TCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 1909980 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 ||||||| ||||| ||||| || || | || || ||||| |||||||| || | Sbjct 1909979 CCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAATTCCAGCATTA 1909920 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| |||| || || || | ||||| |||| ||||| | Sbjct 1909919 GTCT---------GAATG-----TACCGCTTAATTAAAGTGCAATTAATTCTGATAAGCT 1909874 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| | ||||| || || | ||| || || | | || || || | Sbjct 1909873 TCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACAGAATTAGTAATTATTG 1909814 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 || | ||| | | || ||| | | | || ||| ||||| | ||| || | Sbjct 1909813 ATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAACATTAGACAGGCATAGC 1909754 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||||| |||||||||||| ||||| | ||| |||| ||| || || || ||||||| Sbjct 1909753 CACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAATGTCAGACCAGGCATTA 1909694 Query 42135 GGCCACGCTTTTTA-AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193 | || |||||||| ||||| |||| || ||||| || | ||||||||| |||||||| Sbjct 1909693 GTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGAAAAGAAAATTCCTTCC 1909634 Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250 | ||| |||||||| | || | ||| ||| | | | |||| ||||| Sbjct 1909633 ATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTTGTCCCCAATCCAGCGC 1909574 Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310 |||||||| |||||||| || |||||||||| |||| | ||||||||||||||| | Sbjct 1909573 AAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAATGGCATTAAAGAGAAAT 1909514 Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370 | ||| ||| | |||||| || || || || | |||||||||||||| ||||| Sbjct 1909513 TCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 1909454 Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430 ||||||||||||| || || || || |||||||| | ||| || ||||| || |||||| Sbjct 1909453 ATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTAACATGAACTTCT 1909394 Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490 | |||||| || | || ||||| |||||||| || ||| | |||||||| || ||| Sbjct 1909393 TGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCATTTGCTGCAAAGAATGCC 1909334 Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTC-CAATCATTGATATC 42549 | ||| | | ||| || | | | || || || || ||| || | | || || Sbjct 1909333 AGTACGTATGATATGAAGTGTCTGTCCTCAGG-CTTCCGGGCTTCTCAGTGCTGAATGTC 1909275 Query 42550 TTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATT 42609 ||||| | ||| || || || || || ||||| || || || || || || ||||| | Sbjct 1909274 CTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAAGCCTCAGCTTTCTTGTACATCTG 1909215 Query 42610 CCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658 | |||||||| |||| ||| || || | ||||| | | |||||| Sbjct 1909214 AAAAATATCATGGTATTCAATAGGAAAGAAGACAAAGCGAAGAGGATTT 1909166 >seq1663 Length=17039 Score = 336 bits (372), Expect = 3e-87 Identities = 558/802 (70%), Gaps = 29/802 (4%) Strand=Plus/Minus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | |||| ||| ||| || ||||| |||||||||| Sbjct 3242 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTAGGACTTGACATCACTCCCATTT 3183 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || ||||| || | | || | || |||||||| |||| || ||| | ||| | Sbjct 3182 TCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCTTTCAGTGAAACATTCT 3123 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 ||||||| ||||| ||||| || ||| | || || ||||| |||| ||| || | Sbjct 3122 CCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAACCCAGTTCCAGCATTA 3063 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | |||||| || || ||||| | ||||||||||| ||| | | Sbjct 3062 CTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAATTCATTCCGATATGCT 3003 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| | ||||| |||| |||| || || || | | || || Sbjct 3002 TCACAGGCAAGGCCTCGTAAAGAACTTCT-GTTCTATCCCAACAGCATTAATAATTATTT 2944 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | ||||| | | || ||| | | | ||||| ||| | | ||| || || | Sbjct 2943 CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACGTTAGACAGGCAAAGT 2884 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||||| |||||||||||| ||||| | ||| |||||||| || || || ||||||| Sbjct 2883 CACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTCAGACCAGGCATTA 2824 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || |||| | |||||| | || || ||||| || |||||||||| ||||||||| | Sbjct 2823 GTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCAGAAAAGACGATTCCTTCCA 2764 Query 42195 CTGCCGCAAAGGCA-ATAAGT-----CTCTCTCCATAAC-CGGCACTGTCATGTATCCAC 42247 |||| ||||||| | ||| || || | ||| ||| | |||| | | Sbjct 2763 CTGCTGCAAAGGTACATAGGTAGCTTCTTTGTCCCTAATTCAGCAC----AAG------- 2715 Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 |||||||| |||||||| || |||||||| ||| ||| ||||||||||||||| Sbjct 2714 ------GCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAAATGGCATTAAAGAGA 2661 Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367 | | |||| ||| |||||||| || || || || | |||||||||||||| ||| Sbjct 2660 AATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAA 2601 Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427 || |||||||| ||||| || || || || |||||||| | || || |||| || ||| Sbjct 2600 TGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGTTCTGTAATTTGGACT 2542 Query 42428 TCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 | | | |||||| || | || ||||| || ||||| | ||||| || || || ||| Sbjct 2541 TTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCACTTGCCGCTAAGAAC 2482 Query 42488 GCCAATACATGTTTTATAAAAT 42509 |||| ||||||| ||| |||| Sbjct 2481 GCCAGTACATGTGATATGAAAT 2460 >seq4595 Length=7281 Score = 325 bits (360), Expect = 5e-84 Identities = 589/852 (69%), Gaps = 16/852 (2%) Strand=Plus/Minus Query 41804 AAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTA 41863 ||| |||||| ||||| ||| ||||| |||||||| ||||| |||| || || Sbjct 6867 AAAGTAGTCTC-CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTG 6809 Query 41864 TAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTT 41923 | | || ||||| |||| ||| || | ||||| ||| |||||||| ||||| Sbjct 6808 AACACCTTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGC 6749 Query 41924 TTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCT 41983 ||||| | ||||||| ||| ||||| || || || | ||| |||| || || || Sbjct 6748 TTCATTAAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCC 6689 Query 41984 TGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATAC 42043 ||||| || | | | || || | ||||| | | ||| ||| | Sbjct 6688 TGTTCTATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTTTGTGT 6629 Query 42044 AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATT 42103 | | ||||| |||| | || || | || ||||||| ||||||| |||| ||||| Sbjct 6628 AGCAGGTGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATA 6569 Query 42104 AATTCGTT-GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGA 42162 | ||| || |||||| || || || ||||| || | | || || ||||| ||||| || Sbjct 6568 AGTTCATTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGA 6509 Query 42163 CGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 42222 ||||| || |||||||||||||||||||| ||||| |||||||| | || | ||| || Sbjct 6508 TGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTCCCC 6449 Query 42223 ATAACCGGCACTGTCAT-GTATCCACTTTTGAGC-----CCAATCGGCCTTCTTTTTTAC 42276 ||| || | | || | || |||| | | || |||||| |||||||| || || Sbjct 6448 ATA---GGTAATTTCTTTGTCTCCAATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCAC 6392 Query 42277 ACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATA 42336 |||||||||| |||| ||||||||||||||| | | |||| ||| |||||| | || Sbjct 6391 ACAAGGCATCATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATC 6332 Query 42337 TGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCC 42396 || || || | |||||||||||||| ||||| |||||||| ||| | || || || || Sbjct 6331 AGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCC 6272 Query 42397 GTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTC 42456 |||||||| ||||| || |||| || |||||| | |||| | || | || |||| Sbjct 6271 ATAGAAACAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTT 6212 Query 42457 GTTCACTATTCCGTCACTGGCTGCAA-AAAACGCCAATACATGTTTTATAAAATATTTTT 42515 |||||||| || ||||| ||||||| || | || ||||||| | | || ||| | | Sbjct 6211 ATTCACTATGCCATCACTTGCTGCAAGAATGCCACAGTACATGTGATGTGAAGTATCTCT 6152 Query 42516 CGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCT-ACC 42574 || || | | | ||| | | || || || | | ||| || ||||| | | Sbjct 6151 TCTCAGGCTCCAGGGTTTCCCAGTGCTGAATGTCCGTAAAAAGATCCAC--CTTCTCAGC 6094 Query 42575 G-TCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGG 42633 | ||||||| || || || || || || ||||| | ||| |||||||| |||| ||| | Sbjct 6093 GATCCAAAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAG 6034 Query 42634 GAAAATAACAAA 42645 || || ||||| Sbjct 6033 AAAGATGACAAA 6022 >seq205 Length=6054944 Score = 311 bits (344), Expect = 1e-79 Identities = 602/887 (68%), Gaps = 20/887 (2%) Strand=Plus/Plus Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820 ||| ||||||||| | || ||||||| || | || || | || ||| |||||||||| Sbjct 2460975 CATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTC 2461034 Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880 || ||| ||||| |||||||| ||||| ||| | || || | | | ||||| || Sbjct 2461035 CAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACC 2461094 Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940 || ||| || | ||| ||||| ||||||| || || | ||| | ||||| Sbjct 2461095 CAGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATT 2461154 Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000 |||||| ||||| || || || | ||| ||||||| || || ||||| || || || Sbjct 2461155 CATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGC 2461214 Query 42001 GTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 42060 | | || || | ||||| | | || ||| | | | ||||| ||| | Sbjct 2461215 ATTAATAATTATTTCTTTTACTCTCTGCTCTTAAGGTTTTTGTAGAAGGTGTTTGAACGT 2461274 Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120 | || || || || ||||||| |||||||||||| || | | ||| |||||||| || Sbjct 2461275 TAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGGAAAATGT 2461334 Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180 || || ||| | | |||| || ||||| || || || |||| || ||||||| Sbjct 2461335 CAGACCAGGCTT-----CTTGCTTCTTGAGCCAGAACATTGATACAAAAGAATCAGAAAA 2461389 Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTC 42237 ||||| |||||| |||| |||||||| | || ||||||||| | | | |||| Sbjct 2461390 GAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTTCTTTGTC 2461449 Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 ||||| | |||||||| |||||||| || | |||||| |||||||| ||| | Sbjct 2461450 CCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTTCAATGAC 2461509 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357 |||||||| | | | |||| ||| ||||||| || || | || | |||||||| Sbjct 2461510 ATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGAGACTATA 2461569 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 |||||| ||||| ||| |||| ||||| || || ||||| |||||||| | | | || || Sbjct 2461570 CATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGACTTCTGT 2461629 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 || ||| |||| | | |||| | || | || ||||| |||||||| || ||||| || Sbjct 2461630 AATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCATCACTTGC 2461689 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCA 42537 |||||| | |||| | | | ||| |||| || || || | |||| Sbjct 2461690 TGCAAAGA----------ATGTGATGTGAGGTATCTTTCCTCAGG-CTTCAGGACTTCCC 2461738 Query 42538 ATCATTG-ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596 | | || || |||||||| | | | || || | |||||||| || || || || | Sbjct 2461739 AGTACTGAATGTCTTTAGAAAGAGCCACCTCCCCAGTGGTCCAAAAGGAAGCCTCAGCTT 2461798 Query 42597 TTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACA 42643 | || ||| | | ||| |||| ||| |||| ||| || || || ||| Sbjct 2461799 TCTTGTACTTCTGCCAAATATTATGGTATTCAATAGGAAAGATGACA 2461845 >seq3 Length=52730029 Score = 306 bits (338), Expect = 5e-78 Identities = 494/708 (70%), Gaps = 8/708 (1%) Strand=Plus/Plus Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774 |||| |||||| |||| || | ||||| ||| ||| || ||||| |||||||| | Sbjct 13968516 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTAGGACTTGACATCACTCCCATCT 13968575 Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834 | || ||||| || || | ||| || | || ||||||| ||||||| ||| |||| | Sbjct 13968576 TCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCTTCCAGTGAATTATTCT 13968635 Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894 ||||||| ||||| ||||| || || | || || ||||| |||| ||| || Sbjct 13968636 CCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAGTTCCAGCATTG 13968695 Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954 ||| ||||| | ||||| || || ||||| | ||||||||||| |||| || Sbjct 13968696 GTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAATTCATTCCGATAAATT 13968755 Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014 | || || | ||| |||||||||| || | ||| | || || | | || || Sbjct 13968756 TCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACAGCATTAATAATTATTT 13968815 Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074 | ||||| | | || ||| | | | ||||| ||||| | || || || | Sbjct 13968816 CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATTAGGCAGGCAAAGT 13968875 Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134 | ||||||| |||||||||||| ||||| | || |||||||| || || || |||||| Sbjct 13968876 CACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAAAATGTCAGACCAGGCATTG 13968935 Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194 | || | ||| || ||||| ||||| || |||||||| |||||| ||||||||| ||| | Sbjct 13968936 GTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCAGAATAGAAGATTCTTTCCA 13968995 Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 42251 |||| |||||||| || | || ||||| | | | |||| |||| Sbjct 13968996 CTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCTTTGTCCCCAGTCCAGCCCA 13969055 Query 42252 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311 |||||||| || ||| | || |||||||||||| |||| ||||||||||||||| | | Sbjct 13969056 AGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAATGGCATTAAAGAGAAATT 13969115 Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371 | || ||| |||||| || || || || | |||||||||||||| ||||| | Sbjct 13969116 CCCTGTCCTTA--GACTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 13969173 Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419 ||||||| ||||| || || || || |||||||| ||| || |||| Sbjct 13969174 TGTTTTCCATGGCGATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAA 13969221 >seq50 Length=19932738 Score = 282 bits (312), Expect = 6e-71 Identities = 649/963 (67%), Gaps = 37/963 (4%) Strand=Plus/Minus Query 41714 TTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAGAC---ATA--ACTC 41768 ||| |||| |||||| | | ||| |||| ||| ||| || | ||| ||| |||| Sbjct 2663346 TTTATTTAGAAGTCAGCTTTCAAAATAAAAGAATTCTCT-CTAG-GACTTGATAGCACTC 2663289 Query 41769 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA-TTAGTCTTTCCTTCCAATGAT 41827 ||||| | || |||| || || | || || |||||| |||||||| ||||||| ||| Sbjct 2663288 CCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAGTGAA 2663229 Query 41828 ATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA 41887 ||||| |||||||| ||||| ||||| || || | | || ||||| |||| ||| Sbjct 2663228 ATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAGTTCC 2663169 Query 41888 GAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 41947 || | ||| ||||| | |||||| || || ||||| | ||||||||||| Sbjct 2663168 AGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCATTCCG 2663109 Query 41948 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 42007 ||||| || || || | | | ||||||| || | ||||| || || || | Sbjct 2663108 ATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT----- 2663054 Query 42008 ATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACAT 42067 ||| | | || || || |||| || | ||| | |||| | || | Sbjct 2663053 -TAACAATTATTTCT-----TTAACTCTCTGC-TCCAA---AGGTTTGTGTAGCAGGTGT 2663004 Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127 |||| ||| ||| | |||||||||| ||||| | ||| |||||||| ||||| || Sbjct 2663003 TTGAAAAGGCAC-GCAAAGCCTCATCTCTGCTAATAATTTCATTGGAAAATGTGAGGCCA 2662945 Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC-CAGAAAAGAAGAT 42186 |||||||| || | ||| || || | || || || ||||| | |||||||||||| Sbjct 2662944 GGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAAAGAAGAC 2662885 Query 42187 TCCTTCTACTGCC--GCAAAGGCAATAAGTCTCTC----TCCATAACCGGCACTGTCATG 42240 |||||| |||| |||||||||| || | ||| ||||| | | |||| Sbjct 2662884 TCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTT-CTTTGTCCCT 2662826 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||| |||||||| | ||||| |||||||||||||| ||||| ||| || | Sbjct 2662825 AGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAATGCCACT 2662766 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 |||||| | | |||| || |||||||| || || || || | ||||||||||| Sbjct 2662765 GAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACTATACAT 2662706 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || ||| | |||| ||| ||||| || || || | |||||||| | ||| || ||| Sbjct 2662705 TTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTCTATAAT 2662646 Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480 ||| ||||| | ||||| || | || ||||| |||||||| || ||||| ||||| Sbjct 2662645 CTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCACTTGCTGC 2662586 Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATC 42540 ||| || |||| ||||||| || | | ||| || || || | | | | ||| | Sbjct 2662585 AAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAGTTTCCCAGTG 2662526 Query 42541 ATTGATATCTTTAG--ATATATCT---ACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 | || || |||| | |||||| || || || | |||||||| || || | || Sbjct 2662525 CTGAATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGGAAGCCTGAGCT 2662466 Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGA 42655 || || ||||| | ||| ||| |||| ||| ||| || || | ||||| | | ||| Sbjct 2662465 TTCTTGTACATCTGCCAAATACCATGGAATTCAATAGGAAAGAAGACAAAGCACTGAGGA 2662406 Query 42656 TTT 42658 ||| Sbjct 2662405 TTT 2662403 >seq131 Length=9795181 Score = 129 bits (142), Expect = 8e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| || ||||| || || || |||||||| || ||||| | Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611 Query 42207 C 42207 | Sbjct 9778612 C 9778612 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 42315 tttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374 |||| ||| |||||||| || || || || | |||||||||||||| ||||| |||| Sbjct 9781125 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 9781184 Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434 |||| ||||| || || || || |||||||| | ||| || |||| || |||||| | Sbjct 9781185 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTCTTGGC 9781244 Query 42435 AAAATCGTTC 42444 |||||| || Sbjct 9781245 TAAATCGCTC 9781254 Score = 84.2 bits (92), Expect = 3e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Plus Query 42254 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 9778765 GCCCAATCTGCCTTCTTCTTTACACAAGGCATCGTTTCAATGGCATTAAAGAGA 9778818 >seq58 Length=18876681 Score = 129 bits (142), Expect = 8e-25 Identities = 101/121 (83%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| ||||| | ||| || ||||| || || || |||||||| || ||||| | Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||| || ||||| || |||||||||||||||||||| ||||| ||||||| Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574 Query 42207 C 42207 | Sbjct 18847573 C 18847573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 42315 tttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374 |||| ||| |||||||| || || || || | |||||||||||||| ||||| |||| Sbjct 18845060 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 18845001 Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434 |||| ||||| || || || || |||||||| | ||| || |||| || |||||| | Sbjct 18845000 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTCTTGGC 18844941 Query 42435 AAAATCGTTC 42444 |||||| || Sbjct 18844940 TAAATCGCTC 18844931 Score = 84.2 bits (92), Expect = 3e-11 Identities = 51/54 (94%), Gaps = 0/54 (0%) Strand=Plus/Minus Query 42254 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307 |||||||| |||||||| |||||||||||||||||||| ||||||||||||||| Sbjct 18847420 GCCCAATCTGCCTTCTTCTTTACACAAGGCATCGTTTCAATGGCATTAAAGAGA 18847367 >seq140 Length=9235476 Score = 123 bits (136), Expect = 3e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202 || ||||||||||| || || ||||| ||||| || || || |||||||| ||||| | Sbjct 5935768 ACCTGAAATTCTCCTGATAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 5935827 Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262 |||||||||||||||| |||||||||||||| ||||| ||||| || || | | || | Sbjct 5935828 GACTCATTATTTCCCAGTATTTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATTAGTAAA 5935887 Query 71263 CTATTTCTAAGACCAT 71278 || ||||| | ||||| Sbjct 5935888 CTGTTTCTTACACCAT 5935903 Score = 123 bits (136), Expect = 3e-23 Identities = 127/166 (77%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820 |||| || | ||| |||||||| ||||| | || || || || ||||| || || |||| Sbjct 5966775 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAAACTGCAATTCTTGCTGCCAGAA 5966834 Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880 |||||||||| ||||||| ||||| | || || ||| |||| || |||| |||||| | Sbjct 5966835 TGGCATAATCAGGATGTTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTGTCTA 5966894 Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 ||| || || || |||||| |||||| ||||| || || ||||| Sbjct 5966895 GTTCCACAGTGGTGACTCCACTATATAAGCCTTGAATTACTTTCAT 5966940 Score = 114 bits (126), Expect = 2e-20 Identities = 138/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442 || || || ||||| || | | || || ||||||||||| || || |||||||||||| Sbjct 5941825 TAAGTTTCATATGGGCCATGCTCTTTAGCCAGTTCACAACTGGCTTCCAATGCTCCATAA 5941884 Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502 ||||||||||| ||||| | ||| || || || ||||| ||||| ||||| ||||| Sbjct 5941885 TAAATGGTTTCAAAAATTTGCTTGTTCAGTAACTGGGCTTCTGGGCTCTCAAAAGGATAC 5941944 Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562 | | || ||||| || ||||| | ||||| || ||||| || || || | || | Sbjct 5941945 CTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGACGATGACGT 5942004 Query 71563 TTATTAGA 71570 ||||| || Sbjct 5942005 TTATTTGA 5942012 Score = 105 bits (116), Expect = 9e-18 Identities = 126/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| ||||| || |||||||| || ||||| |||| |||| || || || ||||| | Sbjct 5932755 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTCCCATAGTTAGGCTCAGCAATATGAATGT 5932814 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 ||| ||||| |||||||||||||| || ||||| || || ||||| | | || | | Sbjct 5932815 TCAGAGACTGGCTTTGATCGATGAAAGCCCCCCTCTCAGCTGCCATCGTGAGTATAATTT 5932874 Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 | || | |||||||| | || ||||| | | |||| | ||| || |||| Sbjct 5932875 TCTGAGAGATTTCCCACACTGTCTTATAGAGTTGCTTCAGATCATCAGGAA 5932925 Score = 93.3 bits (102), Expect = 6e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 ||||||||||| |||||||| ||||||||||| || | |||| || |||| | ||| Sbjct 5951084 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAATAAGTCCCTGGCACGCTGC 5951143 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 || || ||||| || ||||| || | ||| |||||| | | || || ||||||| || Sbjct 5951144 TCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 5951203 Query 72142 TCCAAGTATATGGC 72155 |||| ||| || || Sbjct 5951204 TCCAGGTAAATAGC 5951217 >seq27 Length=27113625 Score = 122 bits (134), Expect = 1e-22 Identities = 124/159 (78%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109 ||||||||||| | || || || || || |||| |||||||||||| ||||| | ||| Sbjct 23269029 TGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGTTCA 23269088 Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACG-CAAA 42168 |||||||| ||||| | ||||||| | | ||| || ||||| || | || | ||| Sbjct 23269089 TTGGAAAATGTGAG-ACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAAAAA 23269147 Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207 || |||||||||||||||| ||||||||| |||||||| Sbjct 23269148 AGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGC 23269186 >seq1 Length=63721086 Score = 120 bits (132), Expect = 4e-22 Identities = 99/121 (82%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146 |||||||||| || || | |||||||||||| || ||||| ||||| || || | ||| | Sbjct 1747005 CCTCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCT 1747064 Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206 | ||||| ||||||| ||||| |||||||| ||||| || |||||||| || ||||||| Sbjct 1747065 TTAGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGG 1747124 Query 42207 C 42207 | Sbjct 1747125 C 1747125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 670967220580000