Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq260 343 2e-89
seq1663 336 3e-87
seq4595 325 5e-84
seq205 311 1e-79
seq3 306 5e-78
seq50 282 6e-71
seq131 129 8e-25
seq58 129 8e-25
seq140 123 3e-23
seq27 122 1e-22
seq1 120 4e-22
>seq260
Length=4071714
Score = 343 bits (380), Expect = 2e-89
Identities = 648/949 (68%), Gaps = 23/949 (2%)
Strand=Plus/Minus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || | |||| ||| ||| || ||||| |||||||| |
Sbjct 1910099 TTTAGAAGTCATCATCGAAGGTAAAAGAATTCTCTGAAGGACCTGACATGACTCCCATCT 1910040
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || ||| || || | || || || || |||||||| ||||||| ||| ||||| |
Sbjct 1910039 TCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 1909980
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
||||||| ||||| ||||| || || | || || ||||| |||||||| || |
Sbjct 1909979 CCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAATTCCAGCATTA 1909920
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||| |||| || || || | ||||| |||| ||||| |
Sbjct 1909919 GTCT---------GAATG-----TACCGCTTAATTAAAGTGCAATTAATTCTGATAAGCT 1909874
Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014
| || || | ||| | ||||| || || | ||| || || | | || || || |
Sbjct 1909873 TCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATCCTAACAGAATTAGTAATTATTG 1909814
Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074
|| | ||| | | || ||| | | | || ||| ||||| | ||| || |
Sbjct 1909813 ATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATATTTGAACATTAGACAGGCATAGC 1909754
Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134
| ||||||| |||||||||||| ||||| | ||| |||| ||| || || || |||||||
Sbjct 1909753 CACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGGAAATGTCAGACCAGGCATTA 1909694
Query 42135 GGCCACGCTTTTTA-AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCT 42193
| || |||||||| ||||| |||| || ||||| || | ||||||||| ||||||||
Sbjct 1909693 GTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGAACTAGAAAAGAAAATTCCTTCC 1909634
Query 42194 ACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTT 42250
| ||| |||||||| | || | ||| ||| | | | |||| |||||
Sbjct 1909633 ATTGCTGCAAAGGCTACAACACGCTCCGCATGGGTAGCTTCTTTGTCCCCAATCCAGCGC 1909574
Query 42251 TGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAG 42310
|||||||| |||||||| || |||||||||| |||| | ||||||||||||||| |
Sbjct 1909573 AAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCGTTCCAATGGCATTAAAGAGAAAT 1909514
Query 42311 tttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGA 42370
| ||| ||| | |||||| || || || || | |||||||||||||| |||||
Sbjct 1909513 TCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGT 1909454
Query 42371 ATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCT 42430
||||||||||||| || || || || |||||||| | ||| || ||||| || ||||||
Sbjct 1909453 ATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGCAGGCTTCTGTAACATGAACTTCT 1909394
Query 42431 GTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCC 42490
| |||||| || | || ||||| |||||||| || ||| | |||||||| || |||
Sbjct 1909393 TGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGCCATCATTTGCTGCAAAGAATGCC 1909334
Query 42491 AATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTC-CAATCATTGATATC 42549
| ||| | | ||| || | | | || || || || ||| || | | || ||
Sbjct 1909333 AGTACGTATGATATGAAGTGTCTGTCCTCAGG-CTTCCGGGCTTCTCAGTGCTGAATGTC 1909275
Query 42550 TTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATT 42609
||||| | ||| || || || || || ||||| || || || || || || ||||| |
Sbjct 1909274 CTTAGAAAGATCCACCTCCTCCACGGTACAAAAGGAAGCCTCAGCTTTCTTGTACATCTG 1909215
Query 42610 CCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGATTT 42658
| |||||||| |||| ||| || || | ||||| | | ||||||
Sbjct 1909214 AAAAATATCATGGTATTCAATAGGAAAGAAGACAAAGCGAAGAGGATTT 1909166
>seq1663
Length=17039
Score = 336 bits (372), Expect = 3e-87
Identities = 558/802 (70%), Gaps = 29/802 (4%)
Strand=Plus/Minus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || | |||| ||| ||| || ||||| ||||||||||
Sbjct 3242 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTAGGACTTGACATCACTCCCATTT 3183
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || ||||| || | | || | || |||||||| |||| || ||| | ||| |
Sbjct 3182 TCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCCCTTTCAGTGAAACATTCT 3123
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
||||||| ||||| ||||| || ||| | || || ||||| |||| ||| || |
Sbjct 3122 CCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAACCCAGTTCCAGCATTA 3063
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||| ||||| | |||||| || || ||||| | ||||||||||| ||| | |
Sbjct 3062 CTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAATTCATTCCGATATGCT 3003
Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014
| || || | ||| | ||||| |||| |||| || || || | | || ||
Sbjct 3002 TCACAGGCAAGGCCTCGTAAAGAACTTCT-GTTCTATCCCAACAGCATTAATAATTATTT 2944
Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074
| ||||| | | || ||| | | | ||||| ||| | | ||| || || |
Sbjct 2943 CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACGTTAGACAGGCAAAGT 2884
Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134
| ||||||| |||||||||||| ||||| | ||| |||||||| || || || |||||||
Sbjct 2883 CACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGGAAAATGTCAGACCAGGCATTA 2824
Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194
| || |||| | |||||| | || || ||||| || |||||||||| ||||||||| |
Sbjct 2823 GTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAACCAGAAAAGACGATTCCTTCCA 2764
Query 42195 CTGCCGCAAAGGCA-ATAAGT-----CTCTCTCCATAAC-CGGCACTGTCATGTATCCAC 42247
|||| ||||||| | ||| || || | ||| ||| | |||| | |
Sbjct 2763 CTGCTGCAAAGGTACATAGGTAGCTTCTTTGTCCCTAATTCAGCAC----AAG------- 2715
Query 42248 TTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
|||||||| |||||||| || |||||||| ||| ||| |||||||||||||||
Sbjct 2714 ------GCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTTTAAATGGCATTAAAGAGA 2661
Query 42308 TAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAA 42367
| | |||| ||| |||||||| || || || || | |||||||||||||| |||
Sbjct 2660 AATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAA 2601
Query 42368 TGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACT 42427
|| |||||||| ||||| || || || || |||||||| | || || |||| || |||
Sbjct 2600 TGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-GGGTTCTGTAATTTGGACT 2542
Query 42428 TCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487
| | | |||||| || | || ||||| || ||||| | ||||| || || || |||
Sbjct 2541 TTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCATCACTTGCCGCTAAGAAC 2482
Query 42488 GCCAATACATGTTTTATAAAAT 42509
|||| ||||||| ||| ||||
Sbjct 2481 GCCAGTACATGTGATATGAAAT 2460
>seq4595
Length=7281
Score = 325 bits (360), Expect = 5e-84
Identities = 589/852 (69%), Gaps = 16/852 (2%)
Strand=Plus/Minus
Query 41804 AAATTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTA 41863
||| |||||| ||||| ||| ||||| |||||||| ||||| |||| || ||
Sbjct 6867 AAAGTAGTCTC-CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTG 6809
Query 41864 TAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTT 41923
| | || ||||| |||| ||| || | ||||| ||| |||||||| |||||
Sbjct 6808 AACACCTTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGC 6749
Query 41924 TTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCT 41983
||||| | ||||||| ||| ||||| || || || | ||| |||| || || ||
Sbjct 6748 TTCATTAAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCC 6689
Query 41984 TGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATAC 42043
||||| || | | | || || | ||||| | | ||| ||| |
Sbjct 6688 TGTTCTATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTTTGTGT 6629
Query 42044 AATAAATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATT 42103
| | ||||| |||| | || || | || ||||||| ||||||| |||| |||||
Sbjct 6628 AGCAGGTGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATA 6569
Query 42104 AATTCGTT-GGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGA 42162
| ||| || |||||| || || || ||||| || | | || || ||||| ||||| ||
Sbjct 6568 AGTTCATTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGA 6509
Query 42163 CGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCC 42222
||||| || |||||||||||||||||||| ||||| |||||||| | || | ||| ||
Sbjct 6508 TGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACACACTCCCC 6449
Query 42223 ATAACCGGCACTGTCAT-GTATCCACTTTTGAGC-----CCAATCGGCCTTCTTTTTTAC 42276
||| || | | || | || |||| | | || |||||| |||||||| || ||
Sbjct 6448 ATA---GGTAATTTCTTTGTCTCCAATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCAC 6392
Query 42277 ACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATA 42336
|||||||||| |||| ||||||||||||||| | | |||| ||| |||||| | ||
Sbjct 6391 ACAAGGCATCATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATC 6332
Query 42337 TGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCC 42396
|| || || | |||||||||||||| ||||| |||||||| ||| | || || || ||
Sbjct 6331 AGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCC 6272
Query 42397 GTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTC 42456
|||||||| ||||| || |||| || |||||| | |||| | || | || ||||
Sbjct 6271 ATAGAAACAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTT 6212
Query 42457 GTTCACTATTCCGTCACTGGCTGCAA-AAAACGCCAATACATGTTTTATAAAATATTTTT 42515
|||||||| || ||||| ||||||| || | || ||||||| | | || ||| | |
Sbjct 6211 ATTCACTATGCCATCACTTGCTGCAAGAATGCCACAGTACATGTGATGTGAAGTATCTCT 6152
Query 42516 CGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCT-ACC 42574
|| || | | | ||| | | || || || | | ||| || ||||| | |
Sbjct 6151 TCTCAGGCTCCAGGGTTTCCCAGTGCTGAATGTCCGTAAAAAGATCCAC--CTTCTCAGC 6094
Query 42575 G-TCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGG 42633
| ||||||| || || || || || || ||||| | ||| |||||||| |||| ||| |
Sbjct 6093 GATCCAAAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAG 6034
Query 42634 GAAAATAACAAA 42645
|| || |||||
Sbjct 6033 AAAGATGACAAA 6022
>seq205
Length=6054944
Score = 311 bits (344), Expect = 1e-79
Identities = 602/887 (68%), Gaps = 20/887 (2%)
Strand=Plus/Plus
Query 41761 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTC 41820
||| ||||||||| | || ||||||| || | || || | || ||| ||||||||||
Sbjct 2460975 CATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTCCTTC 2461034
Query 41821 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 41880
|| ||| ||||| |||||||| ||||| ||| | || || | | | ||||| ||
Sbjct 2461035 CAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCCTGTTAAAACC 2461094
Query 41881 CAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATT 41940
|| ||| || | ||| ||||| ||||||| || || | ||| | |||||
Sbjct 2461095 CAGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAAGTGCAATT 2461154
Query 41941 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 42000
|||||| ||||| || || || | ||| ||||||| || || ||||| || || ||
Sbjct 2461155 CATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTATCCTAACAGC 2461214
Query 42001 GTCTGTTATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACAT 42060
| | || || | ||||| | | || ||| | | | ||||| ||| |
Sbjct 2461215 ATTAATAATTATTTCTTTTACTCTCTGCTCTTAAGGTTTTTGTAGAAGGTGTTTGAACGT 2461274
Query 42061 CAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGT 42120
| || || || || ||||||| |||||||||||| || | | ||| |||||||| ||
Sbjct 2461275 TAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTCATTGGAAAATGT 2461334
Query 42121 GAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAA 42180
|| || ||| | | |||| || ||||| || || || |||| || |||||||
Sbjct 2461335 CAGACCAGGCTT-----CTTGCTTCTTGAGCCAGAACATTGATACAAAAGAATCAGAAAA 2461389
Query 42181 GAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTC 42237
||||| |||||| |||| |||||||| | || ||||||||| | | | ||||
Sbjct 2461390 GAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGGTAGCTTCTTTGTC 2461449
Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297
||||| | |||||||| |||||||| || | |||||| |||||||| ||| |
Sbjct 2461450 CCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTATCGTTTCAATGAC 2461509
Query 42298 ATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATA 42357
|||||||| | | | |||| ||| ||||||| || || | || | ||||||||
Sbjct 2461510 ATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAATAAGGAGACTATA 2461569
Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417
|||||| ||||| ||| |||| ||||| || || ||||| |||||||| | | | || ||
Sbjct 2461570 CATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAACAGCAGACTTCTGT 2461629
Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477
|| ||| |||| | | |||| | || | || ||||| |||||||| || ||||| ||
Sbjct 2461630 AATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTATGCCATCACTTGC 2461689
Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCA 42537
|||||| | |||| | | | ||| |||| || || || | ||||
Sbjct 2461690 TGCAAAGA----------ATGTGATGTGAGGTATCTTTCCTCAGG-CTTCAGGACTTCCC 2461738
Query 42538 ATCATTG-ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCT 42596
| | || || |||||||| | | | || || | |||||||| || || || || |
Sbjct 2461739 AGTACTGAATGTCTTTAGAAAGAGCCACCTCCCCAGTGGTCCAAAAGGAAGCCTCAGCTT 2461798
Query 42597 TTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACA 42643
| || ||| | | ||| |||| ||| |||| ||| || || || |||
Sbjct 2461799 TCTTGTACTTCTGCCAAATATTATGGTATTCAATAGGAAAGATGACA 2461845
>seq3
Length=52730029
Score = 306 bits (338), Expect = 5e-78
Identities = 494/708 (70%), Gaps = 8/708 (1%)
Strand=Plus/Plus
Query 41718 TTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGA---GACATAACTCCCATTT 41774
|||| |||||| |||| || | ||||| ||| ||| || ||||| |||||||| |
Sbjct 13968516 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTAGGACTTGACATCACTCCCATCT 13968575
Query 41775 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTTT 41834
| || ||||| || || | ||| || | || ||||||| ||||||| ||| |||| |
Sbjct 13968576 TCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCTTCCAGTGAATTATTCT 13968635
Query 41835 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 41894
||||||| ||||| ||||| || || | || || ||||| |||| ||| ||
Sbjct 13968636 CCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAGTTCCAGCATTG 13968695
Query 41895 ATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 41954
||| ||||| | ||||| || || ||||| | ||||||||||| |||| ||
Sbjct 13968696 GTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAATTCATTCCGATAAATT 13968755
Query 41955 TAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAG 42014
| || || | ||| |||||||||| || | ||| | || || | | || ||
Sbjct 13968756 TCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACAGCATTAATAATTATTT 13968815
Query 42015 ATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAAAT 42074
| ||||| | | || ||| | | | ||||| ||||| | || || || |
Sbjct 13968816 CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATTAGGCAGGCAAAGT 13968875
Query 42075 CGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTA 42134
| ||||||| |||||||||||| ||||| | || |||||||| || || || ||||||
Sbjct 13968876 CACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAAAATGTCAGACCAGGCATTG 13968935
Query 42135 GGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTA 42194
| || | ||| || ||||| ||||| || |||||||| |||||| ||||||||| ||| |
Sbjct 13968936 GTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCAGAATAGAAGATTCTTTCCA 13968995
Query 42195 CTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGTATCCACTTTT 42251
|||| |||||||| || | || ||||| | | | |||| ||||
Sbjct 13968996 CTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCTTTGTCCCCAGTCCAGCCCA 13969055
Query 42252 GAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGt 42311
|||||||| || ||| | || |||||||||||| |||| ||||||||||||||| | |
Sbjct 13969056 AGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAATGGCATTAAAGAGAAATT 13969115
Query 42312 ttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAA 42371
| || ||| |||||| || || || || | |||||||||||||| ||||| |
Sbjct 13969116 CCCTGTCCTTA--GACTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTA 13969173
Query 42372 TGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAA 42419
||||||| ||||| || || || || |||||||| ||| || ||||
Sbjct 13969174 TGTTTTCCATGGCGATTTGGAAGCCATAGAAACAGTGGGCTTCTGTAA 13969221
>seq50
Length=19932738
Score = 282 bits (312), Expect = 6e-71
Identities = 649/963 (67%), Gaps = 37/963 (4%)
Strand=Plus/Minus
Query 41714 TTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGTCTTCTTGAGAC---ATA--ACTC 41768
||| |||| |||||| | | ||| |||| ||| ||| || | ||| ||| ||||
Sbjct 2663346 TTTATTTAGAAGTCAGCTTTCAAAATAAAAGAATTCTCT-CTAG-GACTTGATAGCACTC 2663289
Query 41769 CCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA-TTAGTCTTTCCTTCCAATGAT 41827
||||| | || |||| || || | || || |||||| |||||||| ||||||| |||
Sbjct 2663288 CCATTCTCTGACATTCGCCTACTTGCTTCTCAAAAAAAGTTAGTCTTCCCTTCCAGTGAA 2663229
Query 41828 ATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCA 41887
||||| |||||||| ||||| ||||| || || | | || ||||| |||| |||
Sbjct 2663228 ATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAATACCTTCTTAAAACCCAGTTCC 2663169
Query 41888 GAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCT 41947
|| | ||| ||||| | |||||| || || ||||| | |||||||||||
Sbjct 2663168 AGCATTAGTCTGTCTGCCAGGAATTCAATGTACAGCTTCATTAAAGTGCAATTCATTCCG 2663109
Query 41948 ATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTT 42007
||||| || || || | | | ||||||| || | ||||| || || || |
Sbjct 2663108 ATAAGCTTCACAGGCAAGGTCTCAGTAAGGAACTTCTGTTCTATCCTAACAGCAT----- 2663054
Query 42008 ATAATAGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACAT 42067
||| | | || || || |||| || | ||| | |||| | || |
Sbjct 2663053 -TAACAATTATTTCT-----TTAACTCTCTGC-TCCAA---AGGTTTGTGTAGCAGGTGT 2663004
Query 42068 GCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCG 42127
|||| ||| ||| | |||||||||| ||||| | ||| |||||||| ||||| ||
Sbjct 2663003 TTGAAAAGGCAC-GCAAAGCCTCATCTCTGCTAATAATTTCATTGGAAAATGTGAGGCCA 2662945
Query 42128 GGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATC-CAGAAAAGAAGAT 42186
|||||||| || | ||| || || | || || || ||||| | ||||||||||||
Sbjct 2662944 GGCATTAGCCCTCACTTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAAAGAAGAC 2662885
Query 42187 TCCTTCTACTGCC--GCAAAGGCAATAAGTCTCTC----TCCATAACCGGCACTGTCATG 42240
|||||| |||| |||||||||| || | ||| ||||| | | ||||
Sbjct 2662884 TCCTTCCACTGTTTTGCAAAGGCAAAAACACGCTCCCTGTCCATTGCTT-CTTTGTCCCT 2662826
Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300
|||| |||||||| | ||||| |||||||||||||| ||||| ||| || |
Sbjct 2662825 AGTCCAGCACAAGGCCCAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAATGCCACT 2662766
Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360
|||||| | | |||| || |||||||| || || || || | |||||||||||
Sbjct 2662765 GAAGAGAAACTCCCTTTCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACTATACAT 2662706
Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420
|| ||| | |||| ||| ||||| || || || | |||||||| | ||| || |||
Sbjct 2662705 TTTAGAAAGTATGTGTTCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTCTATAAT 2662646
Query 42421 CTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGC 42480
||| ||||| | ||||| || | || ||||| |||||||| || ||||| |||||
Sbjct 2662645 CTGAACTTCGTGGCTAAATCACTCCACCAAGTTTTCATTCACTATGCCATCACTTGCTGC 2662586
Query 42481 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATC 42540
||| || |||| ||||||| || | | ||| || || || | | | | ||| |
Sbjct 2662585 AAATAATGCCAGTACATGTGAAATGACCTCTTTCTCCTCACGTTTCAGAGTTTCCCAGTG 2662526
Query 42541 ATTGATATCTTTAG--ATATATCT---ACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595
| || || |||| | |||||| || || || | |||||||| || || | ||
Sbjct 2662525 CTGAATGTCCTTAGGAAGATATCTTCCACCTCCTCAGCTGTCCAAAAGGAAGCCTGAGCT 2662466
Query 42596 TTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGGA 42655
|| || ||||| | ||| ||| |||| ||| ||| || || | ||||| | | |||
Sbjct 2662465 TTCTTGTACATCTGCCAAATACCATGGAATTCAATAGGAAAGAAGACAAAGCACTGAGGA 2662406
Query 42656 TTT 42658
|||
Sbjct 2662405 TTT 2662403
>seq131
Length=9795181
Score = 129 bits (142), Expect = 8e-25
Identities = 101/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | ||| || ||||| || || || |||||||| || ||||| |
Sbjct 9778492 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 9778551
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||| || ||||| || |||||||||||||||||||| ||||| |||||||
Sbjct 9778552 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 9778611
Query 42207 C 42207
|
Sbjct 9778612 C 9778612
Score = 95.1 bits (104), Expect = 2e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Plus
Query 42315 tttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374
|||| ||| |||||||| || || || || | |||||||||||||| ||||| ||||
Sbjct 9781125 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 9781184
Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434
|||| ||||| || || || || |||||||| | ||| || |||| || |||||| |
Sbjct 9781185 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTCTTGGC 9781244
Query 42435 AAAATCGTTC 42444
|||||| ||
Sbjct 9781245 TAAATCGCTC 9781254
Score = 84.2 bits (92), Expect = 3e-11
Identities = 51/54 (94%), Gaps = 0/54 (0%)
Strand=Plus/Plus
Query 42254 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
|||||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 9778765 GCCCAATCTGCCTTCTTCTTTACACAAGGCATCGTTTCAATGGCATTAAAGAGA 9778818
>seq58
Length=18876681
Score = 129 bits (142), Expect = 8e-25
Identities = 101/121 (83%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| ||||| | ||| || ||||| || || || |||||||| || ||||| |
Sbjct 18847693 CCTCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCT 18847634
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||| || ||||| || |||||||||||||||||||| ||||| |||||||
Sbjct 18847633 TGAGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGG 18847574
Query 42207 C 42207
|
Sbjct 18847573 C 18847573
Score = 95.1 bits (104), Expect = 2e-14
Identities = 99/130 (76%), Gaps = 0/130 (0%)
Strand=Plus/Minus
Query 42315 tttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAATGT 42374
|||| ||| |||||||| || || || || | |||||||||||||| ||||| ||||
Sbjct 18845060 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 18845001
Query 42375 TTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGTAC 42434
|||| ||||| || || || || |||||||| | ||| || |||| || |||||| |
Sbjct 18845000 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTCTTGGC 18844941
Query 42435 AAAATCGTTC 42444
|||||| ||
Sbjct 18844940 TAAATCGCTC 18844931
Score = 84.2 bits (92), Expect = 3e-11
Identities = 51/54 (94%), Gaps = 0/54 (0%)
Strand=Plus/Minus
Query 42254 GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGA 42307
|||||||| |||||||| |||||||||||||||||||| |||||||||||||||
Sbjct 18847420 GCCCAATCTGCCTTCTTCTTTACACAAGGCATCGTTTCAATGGCATTAAAGAGA 18847367
>seq140
Length=9235476
Score = 123 bits (136), Expect = 3e-23
Identities = 109/136 (80%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 71143 ACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACT 71202
|| ||||||||||| || || ||||| ||||| || || || |||||||| ||||| |
Sbjct 5935768 ACCTGAAATTCTCCTGATAAGACTCTGCGAGTATAGATGTTGCTGGTATAAGGTTCAATG 5935827
Query 71203 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGA 71262
|||||||||||||||| |||||||||||||| ||||| ||||| || || | | || |
Sbjct 5935828 GACTCATTATTTCCCAGTATTTGAGCAGTTGAAGCAGTAGGCATTGGGGCAATTAGTAAA 5935887
Query 71263 CTATTTCTAAGACCAT 71278
|| ||||| | |||||
Sbjct 5935888 CTGTTTCTTACACCAT 5935903
Score = 123 bits (136), Expect = 3e-23
Identities = 127/166 (77%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| || | ||| |||||||| ||||| | || || || || ||||| || || ||||
Sbjct 5966775 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAAACTGCAATTCTTGCTGCCAGAA 5966834
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
|||||||||| ||||||| ||||| | || || ||| |||| || |||| |||||| |
Sbjct 5966835 TGGCATAATCAGGATGTTTAGTAGTCAAGGTCGCAGCTGTTTCAGCAGCCAAAGTGTCTA 5966894
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
||| || || || |||||| |||||| ||||| || || |||||
Sbjct 5966895 GTTCCACAGTGGTGACTCCACTATATAAGCCTTGAATTACTTTCAT 5966940
Score = 114 bits (126), Expect = 2e-20
Identities = 138/188 (73%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 71383 TATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAA 71442
|| || || ||||| || | | || || ||||||||||| || || ||||||||||||
Sbjct 5941825 TAAGTTTCATATGGGCCATGCTCTTTAGCCAGTTCACAACTGGCTTCCAATGCTCCATAA 5941884
Query 71443 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAA 71502
||||||||||| ||||| | ||| || || || ||||| ||||| ||||| |||||
Sbjct 5941885 TAAATGGTTTCAAAAATTTGCTTGTTCAGTAACTGGGCTTCTGGGCTCTCAAAAGGATAC 5941944
Query 71503 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTC 71562
| | || ||||| || ||||| | ||||| || ||||| || || || | || |
Sbjct 5941945 CTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGACGATGACGT 5942004
Query 71563 TTATTAGA 71570
||||| ||
Sbjct 5942005 TTATTTGA 5942012
Score = 105 bits (116), Expect = 9e-18
Identities = 126/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927
|||| ||||| || |||||||| || ||||| |||| |||| || || || ||||| |
Sbjct 5932755 TCCAGCCGTAGAAGTGCATACTAGTGAGTTTCCCATAGTTAGGCTCAGCAATATGAATGT 5932814
Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987
||| ||||| |||||||||||||| || ||||| || || ||||| | | || | |
Sbjct 5932815 TCAGAGACTGGCTTTGATCGATGAAAGCCCCCCTCTCAGCTGCCATCGTGAGTATAATTT 5932874
Query 70988 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038
| || | |||||||| | || ||||| | | |||| | ||| || ||||
Sbjct 5932875 TCTGAGAGATTTCCCACACTGTCTTATAGAGTTGCTTCAGATCATCAGGAA 5932925
Score = 93.3 bits (102), Expect = 6e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081
||||||||||| |||||||| ||||||||||| || | |||| || |||| | |||
Sbjct 5951084 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAATAAGTCCCTGGCACGCTGC 5951143
Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141
|| || ||||| || ||||| || | ||| |||||| | | || || ||||||| ||
Sbjct 5951144 TCTTCCTTTCCCGTGTTCTTCTTTAAATCAAGGAACTCAAAGATGTCTAAATGCCAAGGC 5951203
Query 72142 TCCAAGTATATGGC 72155
|||| ||| || ||
Sbjct 5951204 TCCAGGTAAATAGC 5951217
>seq27
Length=27113625
Score = 122 bits (134), Expect = 1e-22
Identities = 124/159 (78%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 42050 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCG 42109
||||||||||| | || || || || || |||| |||||||||||| ||||| | |||
Sbjct 23269029 TGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGTTCA 23269088
Query 42110 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACG-CAAA 42168
|||||||| ||||| | ||||||| | | ||| || ||||| || | || | |||
Sbjct 23269089 TTGGAAAATGTGAG-ACAGGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAAAAA 23269147
Query 42169 TGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGC 42207
|| |||||||||||||||| ||||||||| ||||||||
Sbjct 23269148 AGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGC 23269186
>seq1
Length=63721086
Score = 120 bits (132), Expect = 4e-22
Identities = 99/121 (82%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 42087 CCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 42146
|||||||||| || || | |||||||||||| || ||||| ||||| || || | ||| |
Sbjct 1747005 CCTCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCT 1747064
Query 42147 TAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGG 42206
| ||||| ||||||| ||||| |||||||| ||||| || |||||||| || |||||||
Sbjct 1747065 TTAGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGG 1747124
Query 42207 C 42207
|
Sbjct 1747125 C 1747125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 670967220580000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |