Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq3 262 3e-65 seq1663 232 6e-56 seq205 232 6e-56 seq260 226 2e-54 seq4595 223 3e-53 seq131 111 1e-19 seq58 111 1e-19 seq1 111 1e-19 seq27 96.9 3e-15 >seq3 Length=52730029 Score = 262 bits (290), Expect = 3e-65 Identities = 456/658 (69%), Gaps = 14/658 (2%) Strand=Plus/Plus Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902 ||||||| || ||| || |||||||||| |||||||| ||| | ||||| || | | Sbjct 13968558 TTGACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCC 13968617 Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957 |||| | ||| |||| ||||| || || || ||||||| | ||||| | || Sbjct 13968618 CTTCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACA----TCTTA 13968673 Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017 || | |||| | ||| || | |||||| || ||||| || |||||| |||||||| Sbjct 13968674 TTAAAACCC-AGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAA 13968732 Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077 | || |||||||| || ||||| ||||||| || || || | ||| | | ||||| Sbjct 13968733 AGTGCAATTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAG 13968792 Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATG 13137 ||| || | |||| ||| ||| ||| | | ||| | || | | || || Sbjct 13968793 CCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTG 13968852 Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197 || ||||| | || ||||| ||||||||||| || |||||||| || || || || || Sbjct 13968853 TTTGAACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATT 13968912 Query 13198 TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257 |||||||| ||||| ||||| | |||| || || | ||| ||||| | ||||| || Sbjct 13968913 GGAAAATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGA 13968972 Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTAC 13316 ||| ||| | || |||| ||| ||||||||||| ||| |||| | || ||||| ||| Sbjct 13968973 ACCAGAATAGAAGATTCTTTCCACTGCTGCAAAGGCT-CCAACACGATCCCCATATGTAG 13969031 Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376 | ||| | | |||| |||||| | |||||| || || || ||| Sbjct 13969032 CTTCTTTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCC 13969091 Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436 |||| || || ||||| | | | | | |||||| | || ||| ||||| || || | Sbjct 13969092 TTTCAATGGCATTAAAGAGAAATTCCCTGTCCTTA--GACTTTAATGTAAGTGTCAATAA 13969149 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494 | ||||||||||| ||||| || |||||||| || |||||||| ||||| ||||| Sbjct 13969150 GGAGACTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACA 13969207 >seq1663 Length=17039 Score = 232 bits (256), Expect = 6e-56 Identities = 503/747 (67%), Gaps = 27/747 (4%) Strand=Plus/Minus Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902 ||||||| || |||||| |||||||||| ||| | ||| | ||||| || || | Sbjct 3200 TTGACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCC 3141 Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957 ||| | |||| ||| ||||| || || || ||||||| | |||| | || Sbjct 3140 CTTTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACA----TCTTA 3085 Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017 || | |||| | ||| || | | |||||| || || || || |||||| | |||||||| Sbjct 3084 TTAAAACCC-AGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAA 3026 Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077 | || |||||||| || || ||||||| || || || || || || | |||||| Sbjct 3025 AGTGCAATTCATTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTAT 2967 Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATG 13137 |||| || | |||| ||| ||| ||| | | ||| | || | | || || Sbjct 2966 CCCAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTG 2907 Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197 || ||| | | ||| ||||| ||||||||||| || |||||||| || || || || || Sbjct 2906 TTTGAACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATT 2847 Query 13198 TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257 |||||||| ||||| ||||| || ||| | || | || ||| | || | ||||| || Sbjct 2846 GGAAAATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGA 2787 Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA-C 13316 ||| ||||| | |||||||| ||||||||||| | || |||| ||| | Sbjct 2786 ACCAGAAAAGACGATTCCTTCCACTGCTGCAAA-GGTA------------CATAGGTAGC 2740 Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376 | ||| | || || || |||||| | ||| || | || || || || | Sbjct 2739 TTCTTTGTCCCT-AATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCT 2681 Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436 ||| || || ||||| | | | | |||||||| ||| ||| ||||| || || | Sbjct 2680 TTTAAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAA 2621 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496 | ||||||||||| ||||| || |||||||| || |||||||| ||||| ||||| | Sbjct 2620 GGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC 2561 Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556 | |||| | || |||| | ||||| || | || ||||| || ||||| Sbjct 2560 -GGGTTCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGG 2502 Query 13557 CGTCACTAGCAGCaaaaaaaGCAAGTA 13583 | ||||| || || || || || |||| Sbjct 2501 CATCACTTGCCGCTAAGAACGCCAGTA 2475 >seq205 Length=6054944 Score = 232 bits (256), Expect = 6e-56 Identities = 592/893 (66%), Gaps = 35/893 (4%) Strand=Plus/Plus Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902 ||| ||| || |||| | |||||||| || ||||| || ||| | ||||| | |||| Sbjct 2460971 TTGGCATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTC 2461030 Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957 |||| | |||||||| ||||| || || || ||| ||| | ||||| | Sbjct 2461031 CTTCCAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCC-----T 2461085 Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017 ||| | || | ||| | | | |||||| || || || ||||||| | |||||| Sbjct 2461086 GTTAAAACCCAGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAA 2461145 Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077 | || |||||||| || | || ||||||| || || || | || | | |||||| Sbjct 2461146 AGTGCAATTCATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTAT 2461205 Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGA-- 13135 ||| || | |||| ||| ||| ||| | | |||| | ||| ||| |||| Sbjct 2461206 CCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCTTA---AGGTTTTTGTAGAAG 2461262 Query 13136 -TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTC 13194 || || ||| | | || ||||| ||||||||||| || |||||||| || | || || Sbjct 2461263 GTGTTTGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTC 2461322 Query 13195 GTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254 || |||||||| ||||| ||| | || | || || | ||| || || | |||| Sbjct 2461323 ATTGGAAAATGTCAGACCAGGCTT-----CTTGCTTCTTGAGCCAGAACATTGATACAAA 2461377 Query 13255 CGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTT-TCACCATACG 13313 ||| | ||||| || | |||||| |||| |||||| |||| |||| | || ||||| | Sbjct 2461378 AGAATCAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTA-CAACATGCTCTCCATAGG 2461436 Query 13314 TACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCA 13373 || | ||| | | ||||| | |||||| | ||| || | || | || | Sbjct 2461437 TAGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTA 2461496 Query 13374 TATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTA 13433 | |||| || | ||||| ||| | | |||||||| ||| | | ||||| | | Sbjct 2461497 TCGTTTCAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAA 2461556 Query 13434 TCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAAC 13493 | | | ||||||||||| ||||| || ||||||| || |||||||| ||||| |||| Sbjct 2461557 TAAGGAGACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAAC 2461616 Query 13494 ATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553 | | | |||| | |||||||| | |||| || | |||||||| || |||| Sbjct 2461617 AGCAGACTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTA 2461676 Query 13554 TCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC-GTTTTCT 13612 | || ||||| || ||||| || | ||||| | || ||| || | ||| Sbjct 2461677 TGCCATCACTTGCTGCAAAGAATG---TGATGTG----AGGTATCTTTCCTCAGGCTTC- 2461728 Query 13613 GACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAA 13672 | |||| ||| | ||| ||||| || | | | |||||| || ||||||||| Sbjct 2461729 -AGGACTT--CCCAGTACTGAATGTCTTTAGAAAGAGCCACCTCCCCAGTGGTCCAAAAG 2461785 Query 13673 GAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 ||||| |||| ||||| ||| || ||| |||| | || |||| ||||| Sbjct 2461786 GAAGCCTCAGCTTTCTTGTACTTCTGCCAAATATTATGGTATTCAATAGGAAA 2461838 >seq260 Length=4071714 Score = 226 bits (250), Expect = 2e-54 Identities = 588/894 (66%), Gaps = 37/894 (4%) Strand=Plus/Minus Query 12844 TGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCC 12903 |||||| || ||| || |||||| || ||||| || ||||| ||||| || || || Sbjct 1910056 TGACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCC 1909997 Query 12904 TTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTTT 12958 ||| | |||||||| ||||| || || || ||||||| | ||||| | || | Sbjct 1909996 TTCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACA----TCTTAT 1909941 Query 12959 TTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA 13018 | | |||| ||||| || | | |||| |||||| | || |||||| Sbjct 1909940 TAAAACCC-AATTCCAGCATTAGTCTGA--------------ATGTACCGCTTAATTAAA 1909896 Query 13019 TCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATA 13078 || || |||| || | || ||||||| || ||||| | || | | |||||| Sbjct 1909895 GTGCAATTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATC 1909836 Query 13079 TCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGC 13138 ||| | | ||| ||| | | | | | ||| | || | | |||| Sbjct 1909835 CTAACAGAATTAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATAT 1909776 Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198 || ||||| | ||| ||| | |||||||||| || |||||||| || || || || || Sbjct 1909775 TTGAACATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTG 1909716 Query 13199 GAAAATGTTAGACCCGGCATAAGCCCTCG-TTTTTTAATCCAAAATATAGCAGCAAACGA 13257 | |||||| ||||| ||||| || ||||| |||||| | ||| |||| | ||||| || Sbjct 1909715 GGAAATGTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGA 1909656 Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTAC 13316 || ||||| || |||||||| | ||||||||| |||| |||| | || ||| ||| Sbjct 1909655 ACTAGAAAAGAAAATTCCTTCCATTGCTGCAAAGGCTA-CAACACGCTCCGCATGGGTAG 1909597 Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376 | ||| | | ||||| |||||| | ||| || | ||||| || || Sbjct 1909596 CTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCG 1909537 Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436 || | || || ||||| | | | | ||| |||| || ||| ||||| || || | Sbjct 1909536 TTCCAATGGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAA 1909477 Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496 | ||||||||||| ||||| || ||||| || | |||||||| ||||| ||||| | Sbjct 1909476 GGAGACTATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGC 1909417 Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556 || |||| || |||||||| | ||||| || | |||||||| || ||||| | Sbjct 1909416 AGGCTTCTGTAACATGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGC 1909357 Query 13557 CGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC-----GTTTTC 13611 | ||| | || ||||| || || |||| || || || | | | || | || | Sbjct 1909356 CATCATTTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCC 1909297 Query 13612 TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671 | | || || | ||| || || || | ||| |||||||| ||||| ||||| Sbjct 1909296 GGGCTTCT-----CAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAA 1909242 Query 13672 AGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 ||||| |||| ||||| |||||| | ||||| | || |||| ||||| Sbjct 1909241 GGAAGCCTCAGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAA 1909188 >seq4595 Length=7281 Score = 223 bits (246), Expect = 3e-53 Identities = 594/897 (66%), Gaps = 27/897 (3%) Strand=Plus/Minus Query 12841 ATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTT 12900 |||| |||| || ||| | ||||||| || | ||| || ||||| ||| | Sbjct 6912 ATTTAACATCACTCTCATGCTCTGATATTTGCCTATTCTGTTCTCAAAGTAGTCTC---- 6857 Query 12901 TCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTAT 12955 |||||| |||||||| ||||| || || || |||||| | ||||| Sbjct 6856 -CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTGAACACC----- 6803 Query 12956 TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATT 13015 || ||| | || | ||| || | | ||| | || | || || || ||| | |||||| Sbjct 6802 TTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGCTTCATT 6743 Query 13016 AAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCT 13075 ||| || |||| ||| || | || ||||||| || || || | || | | |||| Sbjct 6742 AAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCCTGTTCT 6683 Query 13076 ATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGA 13135 || || | | | || ||| ||| ||| | | || || || | | || Sbjct 6682 ATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTTTGTGTAGCAGG 6623 Query 13136 TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCG 13195 || || |||| | || |||| ||||||||||| || ||| |||| || || || || Sbjct 6622 TGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCA 6563 Query 13196 TTTG-AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254 |||| ||||||| ||||| |||||||| ||| ||| || | ||| ||||| | ||||| Sbjct 6562 TTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAA 6503 Query 13255 CGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACG 13313 ||||| ||||| || |||||||| ||||||||||| |||| |||| | || ||||| | Sbjct 6502 AGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTA-CAACACACTCCCCATAGG 6444 Query 13314 TACTAT-TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 || | | ||| ||| | ||||| | |||| | ||| || | || || || | Sbjct 6443 TAATTTCTTTGTCTC-CAATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCACACAAGGC 6385 Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432 || |||| || || ||||| | | | | |||||||| ||| | || ||| || Sbjct 6384 ATCATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATCAGTGTCA 6325 Query 13433 ATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAA 13492 || | | ||||||||||| ||||| || |||||||| | |||||||| ||||| ||| Sbjct 6324 ATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAA 6265 Query 13493 CATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACT 13552 || || || |||| | |||||||| | |||| || | ||||||| || ||| Sbjct 6264 CAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACT 6205 Query 13553 ATCCCGTCACTAGCAGCaaaaaaaGCA-AGT--ATGTGCT-TAATAAAttttttttCGTT 13608 || || ||||| || |||| || || ||| ||||| | | | || | || || Sbjct 6204 ATGCCATCACTTGCTGCAAGAATGCCACAGTACATGTGATGTGAAGTATCTCTTCTCAGG 6145 Query 13609 TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 || || || ||| | ||| || | | | ||| |||| |||| || |||| Sbjct 6144 CTC---CAGGGTTTCCCAGTGCTGAATGTCCGTAAAAAGATCCACCTTCTCAGCGATCCA 6088 Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725 ||| ||||| |||| ||||| |||||| ||| ||||| | || |||| |||| Sbjct 6087 AAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAGAAA 6031 >seq131 Length=9795181 Score = 111 bits (122), Expect = 1e-19 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || |||||||| ||||| ||||| || ||||| || || Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| ||||| | ||||| ||||| ||||| || |||||||| ||||||||||| ||| Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613 Query 13295 ATCAAC 13300 | |||| Sbjct 9778614 A-CAAC 9778618 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 13404 tttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATAT 13463 |||||||| ||| ||| ||||| || || | | ||||||||||| ||||| || | Sbjct 9781125 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 9781184 Query 13464 TTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||||||| || |||||||| ||||| ||||| | || |||| | |||||||| Sbjct 9781185 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTC 9781239 >seq58 Length=18876681 Score = 111 bits (122), Expect = 1e-19 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || || || |||||||| ||||| ||||| || ||||| || || Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| ||||| | ||||| ||||| ||||| || |||||||| ||||||||||| ||| Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572 Query 13295 ATCAAC 13300 | |||| Sbjct 18847571 A-CAAC 18847567 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 13404 tttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATAT 13463 |||||||| ||| ||| ||||| || || | | ||||||||||| ||||| || | Sbjct 18845060 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 18845001 Query 13464 TTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518 ||||||| || |||||||| ||||| ||||| | || |||| | |||||||| Sbjct 18845000 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTC 18844946 >seq1 Length=63721086 Score = 111 bits (122), Expect = 1e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || || ||||| ||||| || || ||||||||||| |||| || || Sbjct 1747007 TCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCTTT 1747066 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | ||| |||||||||||||| || || || || || || ||||| || || ||||| ||| Sbjct 1747067 AGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 1747126 Query 13295 ATCAACCTTTCACC 13308 | || |||||| || Sbjct 1747127 ACCACCCTTTCCCC 1747140 Score = 102 bits (112), Expect = 7e-17 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922 ||||||||| ||||| ||||||||| || |||||||||||||| || |||||||||||| Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832 Query 12923 ATAAAATCGAAAGGATTTT 12941 |||||||| || ||||||| Sbjct 1725833 ATAAAATCAAAGGGATTTT 1725851 >seq27 Length=27113625 Score = 96.9 bits (106), Expect = 3e-15 Identities = 132/179 (74%), Gaps = 4/179 (2%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 || || |||||||| | || ||||| ||||| ||||| || |||||||| || || || Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || || |||||||| |||| ||||| | ||| || || | ||| || | | | | Sbjct 23269086 TCATTGGAAAATGTGAGACA-GGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144 Query 13253 AAC-GAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCT-TTCACCA 13309 || ||||| ||||| || |||| ||| ||||||||||| |||| |||| | ||| ||| Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA-CAACATGTTCCCCA 23269202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430874721741000