Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_005179.1
Length=134721
Score E
Sequences producing significant alignments: (Bits) Value
seq3 262 3e-65
seq1663 232 6e-56
seq205 232 6e-56
seq260 226 2e-54
seq4595 223 3e-53
seq131 111 1e-19
seq58 111 1e-19
seq1 111 1e-19
seq27 96.9 3e-15
>seq3
Length=52730029
Score = 262 bits (290), Expect = 3e-65
Identities = 456/658 (69%), Gaps = 14/658 (2%)
Strand=Plus/Plus
Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902
||||||| || ||| || |||||||||| |||||||| ||| | ||||| || | |
Sbjct 13968558 TTGACATCACTCCCATCTTCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCC 13968617
Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957
|||| | ||| |||| ||||| || || || ||||||| | ||||| | ||
Sbjct 13968618 CTTCCAGTGAATTATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACA----TCTTA 13968673
Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017
|| | |||| | ||| || | |||||| || ||||| || |||||| ||||||||
Sbjct 13968674 TTAAAACCC-AGTTCCAGCATTGGTCTGTCTGCCACAAATTCAATGTACCACTTCATTAA 13968732
Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077
| || |||||||| || ||||| ||||||| || || || | ||| | | |||||
Sbjct 13968733 AGTGCAATTCATTCCGATAAATTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAG 13968792
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATG 13137
||| || | |||| ||| ||| ||| | | ||| | || | | || ||
Sbjct 13968793 CCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTG 13968852
Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197
|| ||||| | || ||||| ||||||||||| || |||||||| || || || || ||
Sbjct 13968853 TTTGAACATTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATT 13968912
Query 13198 TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257
|||||||| ||||| ||||| | |||| || || | ||| ||||| | ||||| ||
Sbjct 13968913 GGAAAATGTCAGACCAGGCATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGA 13968972
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTAC 13316
||| ||| | || |||| ||| ||||||||||| ||| |||| | || ||||| |||
Sbjct 13968973 ACCAGAATAGAAGATTCTTTCCACTGCTGCAAAGGCT-CCAACACGATCCCCATATGTAG 13969031
Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376
| ||| | | |||| |||||| | |||||| || || || |||
Sbjct 13969032 CTTCTTTGTCCCCAGTCCAGCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCC 13969091
Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436
|||| || || ||||| | | | | | |||||| | || ||| ||||| || || |
Sbjct 13969092 TTTCAATGGCATTAAAGAGAAATTCCCTGTCCTTA--GACTTTAATGTAAGTGTCAATAA 13969149
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACA 13494
| ||||||||||| ||||| || |||||||| || |||||||| ||||| |||||
Sbjct 13969150 GGAGACTATACATTTCAGAATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACA 13969207
>seq1663
Length=17039
Score = 232 bits (256), Expect = 6e-56
Identities = 503/747 (67%), Gaps = 27/747 (4%)
Strand=Plus/Minus
Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902
||||||| || |||||| |||||||||| ||| | ||| | ||||| || || |
Sbjct 3200 TTGACATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCACAGAAGTTAGTCTTCC 3141
Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957
||| | |||| ||| ||||| || || || ||||||| | |||| | ||
Sbjct 3140 CTTTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACA----TCTTA 3085
Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017
|| | |||| | ||| || | | |||||| || || || || |||||| | ||||||||
Sbjct 3084 TTAAAACCC-AGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAA 3026
Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077
| || |||||||| || || ||||||| || || || || || || | ||||||
Sbjct 3025 AGTGCAATTCATTCCGATATGCTTCACAGGCAAGGCCTC-GTAAAGAACTTCTGTTCTAT 2967
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATG 13137
|||| || | |||| ||| ||| ||| | | ||| | || | | || ||
Sbjct 2966 CCCAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTG 2907
Query 13138 CTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTT 13197
|| ||| | | ||| ||||| ||||||||||| || |||||||| || || || || ||
Sbjct 2906 TTTGAACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATT 2847
Query 13198 TGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGA 13257
|||||||| ||||| ||||| || ||| | || | || ||| | || | ||||| ||
Sbjct 2846 GGAAAATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGA 2787
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTA-C 13316
||| ||||| | |||||||| ||||||||||| | || |||| ||| |
Sbjct 2786 ACCAGAAAAGACGATTCCTTCCACTGCTGCAAA-GGTA------------CATAGGTAGC 2740
Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376
| ||| | || || || |||||| | ||| || | || || || || |
Sbjct 2739 TTCTTTGTCCCT-AATTCAGCACAAGGCCCAATCTGCCTTCTTCTTCACACAAGGAATCT 2681
Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436
||| || || ||||| | | | | |||||||| ||| ||| ||||| || || |
Sbjct 2680 TTTAAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAA 2621
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496
| ||||||||||| ||||| || |||||||| || |||||||| ||||| ||||| |
Sbjct 2620 GGAGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC 2561
Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556
| |||| | || |||| | ||||| || | || ||||| || |||||
Sbjct 2560 -GGGTTCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGG 2502
Query 13557 CGTCACTAGCAGCaaaaaaaGCAAGTA 13583
| ||||| || || || || || ||||
Sbjct 2501 CATCACTTGCCGCTAAGAACGCCAGTA 2475
>seq205
Length=6054944
Score = 232 bits (256), Expect = 6e-56
Identities = 592/893 (66%), Gaps = 35/893 (4%)
Strand=Plus/Plus
Query 12843 TTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTC 12902
||| ||| || |||| | |||||||| || ||||| || ||| | ||||| | ||||
Sbjct 2460971 TTGGCATCACTCCCATTCTCTGATATTCACTTACTCTCTTCTCAGAGAAGTTACTCTTTC 2461030
Query 12903 CTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTT 12957
|||| | |||||||| ||||| || || || ||| ||| | ||||| |
Sbjct 2461031 CTTCCAGTGAAATATTCTCCATGAAGTCAAATGGACTTTCTACTTTGAACACCC-----T 2461085
Query 12958 TTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAA 13017
||| | || | ||| | | | |||||| || || || ||||||| | ||||||
Sbjct 2461086 GTTAAAACCCAGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAA 2461145
Query 13018 ATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTAT 13077
| || |||||||| || | || ||||||| || || || | || | | ||||||
Sbjct 2461146 AGTGCAATTCATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTAT 2461205
Query 13078 ATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGA-- 13135
||| || | |||| ||| ||| ||| | | |||| | ||| ||| ||||
Sbjct 2461206 CCTAACAGCATTAATAATTATTTCTTTTACTCTCTGCTCTTA---AGGTTTTTGTAGAAG 2461262
Query 13136 -TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTC 13194
|| || ||| | | || ||||| ||||||||||| || |||||||| || | || ||
Sbjct 2461263 GTGTTTGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTTC 2461322
Query 13195 GTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254
|| |||||||| ||||| ||| | || | || || | ||| || || | ||||
Sbjct 2461323 ATTGGAAAATGTCAGACCAGGCTT-----CTTGCTTCTTGAGCCAGAACATTGATACAAA 2461377
Query 13255 CGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTT-TCACCATACG 13313
||| | ||||| || | |||||| |||| |||||| |||| |||| | || ||||| |
Sbjct 2461378 AGAATCAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTA-CAACATGCTCTCCATAGG 2461436
Query 13314 TACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCA 13373
|| | ||| | | ||||| | |||||| | ||| || | || | || |
Sbjct 2461437 TAGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTA 2461496
Query 13374 TATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTA 13433
| |||| || | ||||| ||| | | |||||||| ||| | | ||||| | |
Sbjct 2461497 TCGTTTCAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAA 2461556
Query 13434 TCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAAC 13493
| | | ||||||||||| ||||| || ||||||| || |||||||| ||||| ||||
Sbjct 2461557 TAAGGAGACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAAC 2461616
Query 13494 ATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTA 13553
| | | |||| | |||||||| | |||| || | |||||||| || ||||
Sbjct 2461617 AGCAGACTTCTGTAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACTA 2461676
Query 13554 TCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC-GTTTTCT 13612
| || ||||| || ||||| || | ||||| | || ||| || | |||
Sbjct 2461677 TGCCATCACTTGCTGCAAAGAATG---TGATGTG----AGGTATCTTTCCTCAGGCTTC- 2461728
Query 13613 GACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAA 13672
| |||| ||| | ||| ||||| || | | | |||||| || |||||||||
Sbjct 2461729 -AGGACTT--CCCAGTACTGAATGTCTTTAGAAAGAGCCACCTCCCCAGTGGTCCAAAAG 2461785
Query 13673 GAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725
||||| |||| ||||| ||| || ||| |||| | || |||| |||||
Sbjct 2461786 GAAGCCTCAGCTTTCTTGTACTTCTGCCAAATATTATGGTATTCAATAGGAAA 2461838
>seq260
Length=4071714
Score = 226 bits (250), Expect = 2e-54
Identities = 588/894 (66%), Gaps = 37/894 (4%)
Strand=Plus/Minus
Query 12844 TGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCC 12903
|||||| || ||| || |||||| || ||||| || ||||| ||||| || || ||
Sbjct 1910056 TGACATGACTCCCATCTTCTGATATCTGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCC 1909997
Query 12904 TTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTATTTT 12958
||| | |||||||| ||||| || || || ||||||| | ||||| | || |
Sbjct 1909996 TTCCAGTGAAATATTCTCCATGAAGTCAAATGGATTTTCTACTTTGAACA----TCTTAT 1909941
Query 12959 TTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAA 13018
| | |||| ||||| || | | |||| |||||| | || ||||||
Sbjct 1909940 TAAAACCC-AATTCCAGCATTAGTCTGA--------------ATGTACCGCTTAATTAAA 1909896
Query 13019 TCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATA 13078
|| || |||| || | || ||||||| || ||||| | || | | ||||||
Sbjct 1909895 GTGCAATTAATTCTGATAAGCTTCACAGGCAATGCCTCTGTAAGGAACTCCTATTCTATC 1909836
Query 13079 TCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGATGC 13138
||| | | ||| ||| | | | | | ||| | || | | ||||
Sbjct 1909835 CTAACAGAATTAGTAATTATTGATTTAACTCTCTGCTCCGAAGGTTTGTGTAGCAGATAT 1909776
Query 13139 TTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTT 13198
|| ||||| | ||| ||| | |||||||||| || |||||||| || || || || ||
Sbjct 1909775 TTGAACATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTG 1909716
Query 13199 GAAAATGTTAGACCCGGCATAAGCCCTCG-TTTTTTAATCCAAAATATAGCAGCAAACGA 13257
| |||||| ||||| ||||| || ||||| |||||| | ||| |||| | ||||| ||
Sbjct 1909715 GGAAATGTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAAAAGA 1909656
Query 13258 ACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACGTAC 13316
|| ||||| || |||||||| | ||||||||| |||| |||| | || ||| |||
Sbjct 1909655 ACTAGAAAAGAAAATTCCTTCCATTGCTGCAAAGGCTA-CAACACGCTCCGCATGGGTAG 1909597
Query 13317 TATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATAT 13376
| ||| | | ||||| |||||| | ||| || | ||||| || ||
Sbjct 1909596 CTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGGCAGCG 1909537
Query 13377 TTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCA 13436
|| | || || ||||| | | | | ||| |||| || ||| ||||| || || |
Sbjct 1909536 TTCCAATGGCATTAAAGAGAAATTCCCTTTTCTTAGAAACTTTAATGTAAGTGTCAATAA 1909477
Query 13437 ATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATC 13496
| ||||||||||| ||||| || ||||| || | |||||||| ||||| ||||| |
Sbjct 1909476 GGAGACTATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGAAACAGC 1909417
Query 13497 TAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCC 13556
|| |||| || |||||||| | ||||| || | |||||||| || ||||| |
Sbjct 1909416 AGGCTTCTGTAACATGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCACTATGC 1909357
Query 13557 CGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttC-----GTTTTC 13611
| ||| | || ||||| || || |||| || || || | | | || | || |
Sbjct 1909356 CATCATTTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCAGGCTTCC 1909297
Query 13612 TGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAA 13671
| | || || | ||| || || || | ||| |||||||| ||||| |||||
Sbjct 1909296 GGGCTTCT-----CAGTGCTGAATGTCCTTAGAAAGATCCACCTCCTCCACGGTACAAAA 1909242
Query 13672 AGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725
||||| |||| ||||| |||||| | ||||| | || |||| |||||
Sbjct 1909241 GGAAGCCTCAGCTTTCTTGTACATCTGAAAAATATCATGGTATTCAATAGGAAA 1909188
>seq4595
Length=7281
Score = 223 bits (246), Expect = 3e-53
Identities = 594/897 (66%), Gaps = 27/897 (3%)
Strand=Plus/Minus
Query 12841 ATTTGACATAACAGACATTTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTT 12900
|||| |||| || ||| | ||||||| || | ||| || ||||| ||| |
Sbjct 6912 ATTTAACATCACTCTCATGCTCTGATATTTGCCTATTCTGTTCTCAAAGTAGTCTC---- 6857
Query 12901 TCCTTCTAACGAAATATTTTCCATAAAATCGAAAGGATTTT-----TCGAACAATAGTAT 12955
|||||| |||||||| ||||| || || || |||||| | |||||
Sbjct 6856 -CCTTCTTGTGAAATATTCTCCATGAAGTCAAATAGATTTTCTACTTTGAACACC----- 6803
Query 12956 TTTTTACACCCTAATTCTAGTAACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATT 13015
|| ||| | || | ||| || | | ||| | || | || || || ||| | ||||||
Sbjct 6802 TTATTAAAACCCAGTTCCAGCATTAGTCTATTTGCCATGAATTCAATATACCGCTTCATT 6743
Query 13016 AAATCACAGTTCATTCCTATTAATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCT 13075
||| || |||| ||| || | || ||||||| || || || | || | | ||||
Sbjct 6742 AAAGTGCAATTCACTCCGATAAGCTTCACAGGCACGGCCTCAGTGAGGAACTCCTGTTCT 6683
Query 13076 ATATCAACTGCTTCGATAACTATGTCTCTTATTACGTTCTCTAATGGAGGATTTGATAGA 13135
|| || | | | || ||| ||| ||| | | || || || | | ||
Sbjct 6682 ATCCTAATAGTATTAACAATTATTTCTTTTACTCTCTGTTCCAAAGGTTTGTGTAGCAGG 6623
Query 13136 TGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCG 13195
|| || |||| | || |||| ||||||||||| || ||| |||| || || || ||
Sbjct 6622 TGTTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCA 6563
Query 13196 TTTG-AAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAA 13254
|||| ||||||| ||||| |||||||| ||| ||| || | ||| ||||| | |||||
Sbjct 6562 TTTGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAA 6503
Query 13255 CGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAAC-CTTTCACCATACG 13313
||||| ||||| || |||||||| ||||||||||| |||| |||| | || ||||| |
Sbjct 6502 AGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTA-CAACACACTCCCCATAGG 6444
Query 13314 TACTAT-TTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372
|| | | ||| ||| | ||||| | |||| | ||| || | || || || |
Sbjct 6443 TAATTTCTTTGTCTC-CAATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCACACAAGGC 6385
Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432
|| |||| || || ||||| | | | | |||||||| ||| | || ||| ||
Sbjct 6384 ATCATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATCAGTGTCA 6325
Query 13433 ATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAA 13492
|| | | ||||||||||| ||||| || |||||||| | |||||||| ||||| |||
Sbjct 6324 ATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAA 6265
Query 13493 CATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACT 13552
|| || || |||| | |||||||| | |||| || | ||||||| || |||
Sbjct 6264 CAGCTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACT 6205
Query 13553 ATCCCGTCACTAGCAGCaaaaaaaGCA-AGT--ATGTGCT-TAATAAAttttttttCGTT 13608
|| || ||||| || |||| || || ||| ||||| | | | || | || ||
Sbjct 6204 ATGCCATCACTTGCTGCAAGAATGCCACAGTACATGTGATGTGAAGTATCTCTTCTCAGG 6145
Query 13609 TTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668
|| || || ||| | ||| || | | | ||| |||| |||| || ||||
Sbjct 6144 CTC---CAGGGTTTCCCAGTGCTGAATGTCCGTAAAAAGATCCACCTTCTCAGCGATCCA 6088
Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAATGGGAAA 13725
||| ||||| |||| ||||| |||||| ||| ||||| | || |||| ||||
Sbjct 6087 AAAGGAAGCCTCAGCTTTCTTGTACATCTGCCAAATATCATGGTATTCAATAAGAAA 6031
>seq131
Length=9795181
Score = 111 bits (122), Expect = 1e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
|||||||| || || || || || |||||||| ||||| ||||| || ||||| || ||
Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| ||| ||||| | ||||| ||||| ||||| || |||||||| ||||||||||| |||
Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613
Query 13295 ATCAAC 13300
| ||||
Sbjct 9778614 A-CAAC 9778618
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 13404 tttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATAT 13463
|||||||| ||| ||| ||||| || || | | ||||||||||| ||||| || |
Sbjct 9781125 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 9781184
Query 13464 TTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518
||||||| || |||||||| ||||| ||||| | || |||| | ||||||||
Sbjct 9781185 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTC 9781239
>seq58
Length=18876681
Score = 111 bits (122), Expect = 1e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
|||||||| || || || || || |||||||| ||||| ||||| || ||||| || ||
Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| ||| ||||| | ||||| ||||| ||||| || |||||||| ||||||||||| |||
Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572
Query 13295 ATCAAC 13300
| ||||
Sbjct 18847571 A-CAAC 18847567
Score = 82.4 bits (90), Expect = 7e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 13404 tttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATAT 13463
|||||||| ||| ||| ||||| || || | | ||||||||||| ||||| || |
Sbjct 18845060 TTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGT 18845001
Query 13464 TTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTC 13518
||||||| || |||||||| ||||| ||||| | || |||| | ||||||||
Sbjct 18845000 TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATTTGAACTTC 18844946
>seq1
Length=63721086
Score = 111 bits (122), Expect = 1e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234
|||||||| || || || ||||| ||||| || || ||||||||||| |||| || ||
Sbjct 1747007 TCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCTTT 1747066
Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294
| ||| |||||||||||||| || || || || || || ||||| || || ||||| |||
Sbjct 1747067 AGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 1747126
Query 13295 ATCAACCTTTCACC 13308
| || |||||| ||
Sbjct 1747127 ACCACCCTTTCCCC 1747140
Score = 102 bits (112), Expect = 7e-17
Identities = 70/79 (89%), Gaps = 0/79 (0%)
Strand=Plus/Plus
Query 12863 TGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATTTTCC 12922
||||||||| ||||| ||||||||| || |||||||||||||| || ||||||||||||
Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832
Query 12923 ATAAAATCGAAAGGATTTT 12941
|||||||| || |||||||
Sbjct 1725833 ATAAAATCAAAGGGATTTT 1725851
>seq27
Length=27113625
Score = 96.9 bits (106), Expect = 3e-15
Identities = 132/179 (74%), Gaps = 4/179 (2%)
Strand=Plus/Plus
Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192
|| || |||||||| | || ||||| ||||| ||||| || |||||||| || || ||
Sbjct 23269026 AGGTGTTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGT 23269085
Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252
|| || |||||||| |||| ||||| | ||| || || | ||| || | | | |
Sbjct 23269086 TCATTGGAAAATGTGAGACA-GGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAA 23269144
Query 13253 AAC-GAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCT-TTCACCA 13309
|| ||||| ||||| || |||| ||| ||||||||||| |||| |||| | ||| |||
Sbjct 23269145 AAAAGAACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTA-CAACATGTTCCCCA 23269202
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 430874721741000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |