Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq9 109 5e-19 >seq9 Length=38215745 Score = 109 bits (120), Expect = 5e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 127171 GGGTGCCAAGCTCTGTCTGAGATGATTCAGTTCTACCTCGAAGAGGTCATGCCACAGGCA 127230 || ||||||||| ||||||||||||| |||| ||||| || | ||| ||||| ||||| Sbjct 15088895 GGTTGCCAAGCTTTGTCTGAGATGATCAAGTTTTACCTGGAGGCGGTGATGCCGCAGGCT 15088954 Query 127231 GAAAATCACGGACCCGACATAAAAGAACACGTCAATTCCCTGGGTGAAAAGCTGAAGACA 127290 || || || | ||||| || || || || || ||||||||||| |||||||||| ||| Sbjct 15088955 GAGAACCAAGACCCCGATATCAAGGAGCATGTGAATTCCCTGGGGGAAAAGCTGACAACA 15089014 Query 127291 TTGAGACTTCGACTGCGTCGCTG 127313 | || ||||||| ||||| Sbjct 15089015 CTCAGGACCAGACTGCGGCGCTG 15089037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429946953596000