Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq46 84.2 2e-11 >seq46 Length=21197313 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 48512 CTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCG 48571 || ||||| | |||||| ||| |||||||||||||||||| |||| || | || | Sbjct 15668216 CTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAGGTTGCGTCCA 15668275 Query 48572 TCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTG 48631 || ||||| ||||| || | |||| | | ||||||||| || | |||||||| Sbjct 15668276 TCTTCCAGTTGCTTGCCAGCAAAAATCAGTCTCTGCTGATCAGTAGGAATTCTTTCCTTA 15668335 Query 48632 TCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATG 48691 ||| || ||| ||| | | | || || || | | || ||||| || || Sbjct 15668336 TCCTGGATCTTCGCCTTTACATTTTCGATCGTGTCCGAGGTTTCGACCTCGAAAGTGATT 15668395 Query 48692 GTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTG 48730 ||||| || || || |||| || |||||||||||| || Sbjct 15668396 GTTTTTCCCGTTAGGGTTTGTACGAAAATCTGCATCTTG 15668434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421145953020500