Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_006146.1 Length=171096 Score E Sequences producing significant alignments: (Bits) Value seq9 107 2e-18 >seq9 Length=38215745 Score = 107 bits (118), Expect = 2e-18 Identities = 106/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 10140 AGGGCTACCTGGGATGTCAGGCCCTGTCTGAAATGATCCAGTTTTACCTGGAGGAAGTAA 10199 |||| |||||||| || || || ||||||| |||||| ||||||||||||||| || | Sbjct 15088884 AGGGTTACCTGGGTTGCCAAGCTTTGTCTGAGATGATCAAGTTTTACCTGGAGGCGGTGA 15088943 Query 10200 TGCCACAGGCTGAAAATCAGGACCCCCACGCCAAAGAGCACGTGAACTCTCTGGGCGAGA 10259 |||| |||||||| || || |||||| | ||| ||||| ||||| || ||||| || | Sbjct 15088944 TGCCGCAGGCTGAGAACCAAGACCCCGATATCAAGGAGCATGTGAATTCCCTGGGGGAAA 15089003 Query 10260 ATCTAAAGACCCTAAGG 10276 | || | || || ||| Sbjct 15089004 AGCTGACAACACTCAGG 15089020 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547238934080000