Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq143 102 8e-17
seq46 96.9 3e-15
seq87 87.8 2e-12
seq20 87.8 2e-12
seq38 84.2 2e-11
seq16 84.2 2e-11
seq281 82.4 7e-11
seq3 82.4 7e-11
>seq143
Length=9160510
Score = 102 bits (112), Expect = 8e-17
Identities = 162/229 (71%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || ||||| || ||||| || | || ||| | ||| |||| | |
Sbjct 9114997 ATGCAGATCTTCGTGAAAACCTTGACTGGTAAGACCATTACCCTTGAAGTAGAGCCCAGT 9115056
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|||||||| ||| | |||||| ||||||| ||||||||||| || ||||| || ||
Sbjct 9115057 GACACCATTGAGAATGTCAAAGCAAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAG 9115116
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946
|| ||| | || | | || ||||| || ||||| | | | || ||| ||||| |
Sbjct 9115117 CAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGACAAGCGCACACTGTC--TGACTACA 9115174
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||| || ||||||||||| | || |||||||| | | || |||||
Sbjct 9115175 ACATCCAGAAAGAATCTACCCTGCACTTGGTCCTGCGTTTGAGGGGAGG 9115223
>seq46
Length=21197313
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || ||| |||| |||| |||||| | ||||| |||| | ||| |
Sbjct 15668434 CAAGATGCAGATTTTCGTACAAACCCTAACGGGAAAAACAATCACTTTCGAGGTCGAAAC 15668375
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
||||| ||||| | || || ||||| || || ||| | || ||| | ||
Sbjct 15668374 CTCGGACACGATCGAAAATGTAAAGGCGAAGATCCAGGATAAGGAAAGAATTCCTACTGA 15668315
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || ||||| |||| | ||||| ||||| ||||||| | ||| | |||||
Sbjct 15668314 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGCAACCTGTCTGACTA 15668255
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| || || ||| | ||||| || |||||||| | || ||
Sbjct 15668254 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 15668204
>seq87
Length=12919766
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | ||||||||| | |||| || || ||||||| |||| | |||
Sbjct 9400338 CAAGATGCAGATTTTTGTAAAAGCCCTAACAGGGAAGACGATCACTCTCGAGGTCGAACG 9400279
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||||| | || || ||||| || || ||||| || ||||| ||
Sbjct 9400278 CTCGGATACAATCGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 9400219
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || ||||| |||| | ||||| ||||| ||| ||| | | | | |||||
Sbjct 9400218 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAAATGGATGCACCCTGTCTGACTA 9400159
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| || || ||| | ||||| || |||||||| | || ||
Sbjct 9400158 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTTGTGGTGG 9400108
>seq20
Length=29555478
Score = 87.8 bits (96), Expect = 2e-12
Identities = 158/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || |||||||| |||| || || ||||||| |||| | ||| |
Sbjct 26627853 CAAGATGCAGATTTTCGTAAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAACC 26627912
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||||| | || || ||||| | || ||||| || ||||| ||
Sbjct 26627913 CTCAGATACAATCGAAAATGTAAAGGCCAAGATCCAGCATAAGGAAGGAATTCCTCCTGA 26627972
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || ||||| |||| | ||| | ||||| ||||||| | | | | |||||
Sbjct 26627973 TCAGCAGAGACTGATTTTTGCTGGCGAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 26628032
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| || || ||| | ||||| || |||||||| | || ||
Sbjct 26628033 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 26628083
>seq38
Length=23493148
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || ||||||| | || || || ||||||| |||| | || |
Sbjct 5891102 CAAGATGCAGATTTTCTTAAAAACCCTGACGGGGAAGACGATCACTCTCGAGGTCAAACC 5891043
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||||| | || || ||||| || || ||||| || ||||| ||
Sbjct 5891042 CTCGGATACGATCGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 5890983
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || ||||| |||| | ||||| ||||| ||||||| | | | | |||||
Sbjct 5890982 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 5890923
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| || || ||| | ||||| || |||||||| | || ||
Sbjct 5890922 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 5890872
>seq16
Length=33020160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 157/231 (68%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824
||| ||||| | || ||||||| |||| || || ||||||| |||| | ||| |
Sbjct 11073988 CAAGATGCAGATTTTCGTAAAAAACCTAACGGGGAAGACGATCACTCTCGAGGTCGAACC 11074047
Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884
|| || ||| | | || || ||||| || || ||||| || ||||| ||
Sbjct 11074048 CTCAGATACAATCAAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 11074107
Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944
||| || ||||| |||| | || || ||||| ||||||| | | | | |||||
Sbjct 11074108 TCAGCAGAGACTGATTTTTGCTGGTAAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 11074167
Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||||||||| || || ||| | ||||| || |||||||| | || ||
Sbjct 11074168 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 11074218
>seq281
Length=3633602
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827
|||||| | ||||| ||||| | || || ||| | || ||| | || | || | |
Sbjct 126707 AATGCAGATCTTTGTGAAAACTCTCACGGGTAAAACTATTACCCTTGAGGTTGAGCCCAG 126648
Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887
|||||||| ||| | ||||| |||||| ||||||||||| || || || || ||
Sbjct 126647 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 126588
Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947
|| ||| | || | | || |||||||| ||||||| | | | || || ||
Sbjct 126587 GCAGAGATTGATCTTTGCTGGGAAACAACTGGAAGATGGCCGTACTCTGTCTGATTACAA 126528
Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||| || |||||||| || | || |||||||| | || ||||| ||
Sbjct 126527 CATCCAGAAAGAATCCACCCTGCACCTGGTCCTTCGTCTGAGAGGGGG 126480
>seq3
Length=52730029
Score = 82.4 bits (90), Expect = 7e-11
Identities = 97/128 (76%), Gaps = 4/128 (3%)
Strand=Plus/Minus
Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921
|| || ||||| || ||||| ||||| || ||||| |||| | ||||| ||||| |||
Sbjct 39783201 GATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATTTCTGCTGGCAAGCAACTGGAA 39783142
Query 26922 GATG-ATAGAAAC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979
|||| | | | | ||| | |||| ||||||||||| || |||||| | ||||| ||
Sbjct 39783141 GATGGACACACCCTGTCTG--ACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGT 39783084
Query 26980 TGAGACTT 26987
||||||||
Sbjct 39783083 TGAGACTT 39783076
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478539742760000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |