Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq143 102 8e-17 seq46 96.9 3e-15 seq87 87.8 2e-12 seq20 87.8 2e-12 seq38 84.2 2e-11 seq16 84.2 2e-11 seq281 82.4 7e-11 seq3 82.4 7e-11 >seq143 Length=9160510 Score = 102 bits (112), Expect = 8e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || ||||| || ||||| || | || ||| | ||| |||| | | Sbjct 9114997 ATGCAGATCTTCGTGAAAACCTTGACTGGTAAGACCATTACCCTTGAAGTAGAGCCCAGT 9115056 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||| ||| | |||||| ||||||| ||||||||||| || ||||| || || Sbjct 9115057 GACACCATTGAGAATGTCAAAGCAAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAG 9115116 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG-AAAC-GTCAGCGACTATA 26946 || ||| | || | | || ||||| || ||||| | | | || ||| ||||| | Sbjct 9115117 CAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGACAAGCGCACACTGTC--TGACTACA 9115174 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||| || ||||||||||| | || |||||||| | | || ||||| Sbjct 9115175 ACATCCAGAAAGAATCTACCCTGCACTTGGTCCTGCGTTTGAGGGGAGG 9115223 >seq46 Length=21197313 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || ||| |||| |||| |||||| | ||||| |||| | ||| | Sbjct 15668434 CAAGATGCAGATTTTCGTACAAACCCTAACGGGAAAAACAATCACTTTCGAGGTCGAAAC 15668375 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 ||||| ||||| | || || ||||| || || ||| | || ||| | || Sbjct 15668374 CTCGGACACGATCGAAAATGTAAAGGCGAAGATCCAGGATAAGGAAAGAATTCCTACTGA 15668315 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| |||| | ||||| ||||| ||||||| | ||| | ||||| Sbjct 15668314 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGCAACCTGTCTGACTA 15668255 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 15668254 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 15668204 >seq87 Length=12919766 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | ||||||||| | |||| || || ||||||| |||| | ||| Sbjct 9400338 CAAGATGCAGATTTTTGTAAAAGCCCTAACAGGGAAGACGATCACTCTCGAGGTCGAACG 9400279 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||||| | || || ||||| || || ||||| || ||||| || Sbjct 9400278 CTCGGATACAATCGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 9400219 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| |||| | ||||| ||||| ||| ||| | | | | ||||| Sbjct 9400218 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAAATGGATGCACCCTGTCTGACTA 9400159 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 9400158 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTTGTGGTGG 9400108 >seq20 Length=29555478 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || |||||||| |||| || || ||||||| |||| | ||| | Sbjct 26627853 CAAGATGCAGATTTTCGTAAAAACCCTAACGGGGAAGACGATCACTCTCGAGGTCGAACC 26627912 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||||| | || || ||||| | || ||||| || ||||| || Sbjct 26627913 CTCAGATACAATCGAAAATGTAAAGGCCAAGATCCAGCATAAGGAAGGAATTCCTCCTGA 26627972 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| |||| | ||| | ||||| ||||||| | | | | ||||| Sbjct 26627973 TCAGCAGAGACTGATTTTTGCTGGCGAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 26628032 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 26628033 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 26628083 >seq38 Length=23493148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || ||||||| | || || || ||||||| |||| | || | Sbjct 5891102 CAAGATGCAGATTTTCTTAAAAACCCTGACGGGGAAGACGATCACTCTCGAGGTCAAACC 5891043 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||||| | || || ||||| || || ||||| || ||||| || Sbjct 5891042 CTCGGATACGATCGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 5890983 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| |||| | ||||| ||||| ||||||| | | | | ||||| Sbjct 5890982 TCAGCAGAGACTGATTTTTGCTGGCAAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 5890923 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 5890922 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 5890872 >seq16 Length=33020160 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26765 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATC 26824 ||| ||||| | || ||||||| |||| || || ||||||| |||| | ||| | Sbjct 11073988 CAAGATGCAGATTTTCGTAAAAAACCTAACGGGGAAGACGATCACTCTCGAGGTCGAACC 11074047 Query 26825 AAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGA 26884 || || ||| | | || || ||||| || || ||||| || ||||| || Sbjct 11074048 CTCAGATACAATCAAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 11074107 Query 26885 TCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTA 26944 ||| || ||||| |||| | || || ||||| ||||||| | | | | ||||| Sbjct 11074108 TCAGCAGAGACTGATTTTTGCTGGTAAGCAACTGGAAGATGGACGCACCCTGTCTGACTA 11074167 Query 26945 TAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||||||||||| || || ||| | ||||| || |||||||| | || || Sbjct 11074168 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 11074218 >seq281 Length=3633602 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | ||||| ||||| | || || ||| | || ||| | || | || | | Sbjct 126707 AATGCAGATCTTTGTGAAAACTCTCACGGGTAAAACTATTACCCTTGAGGTTGAGCCCAG 126648 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||||||| ||| | ||||| |||||| ||||||||||| || || || || || Sbjct 126647 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 126588 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || ||| | || | | || |||||||| ||||||| | | | || || || Sbjct 126587 GCAGAGATTGATCTTTGCTGGGAAACAACTGGAAGATGGCCGTACTCTGTCTGATTACAA 126528 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 ||| || |||||||| || | || |||||||| | || ||||| || Sbjct 126527 CATCCAGAAAGAATCCACCCTGCACCTGGTCCTTCGTCTGAGAGGGGG 126480 >seq3 Length=52730029 Score = 82.4 bits (90), Expect = 7e-11 Identities = 97/128 (76%), Gaps = 4/128 (3%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| || ||||| |||| | ||||| ||||| ||| Sbjct 39783201 GATAAGGAAGGAATTCCTCCTGATCAGCAGAGACTGATTTCTGCTGGCAAGCAACTGGAA 39783142 Query 26922 GATG-ATAGAAAC-GTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCC 26979 |||| | | | | ||| | |||| ||||||||||| || |||||| | ||||| || Sbjct 39783141 GATGGACACACCCTGTCTG--ACTACAACATTCAAAAGGAGTCTACTCTTCATCTTGTGT 39783084 Query 26980 TGAGACTT 26987 |||||||| Sbjct 39783083 TGAGACTT 39783076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478539742760000