Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 7e-15 seq205 86.0 1e-11 >seq1 Length=63721086 Score = 96.9 bits (106), Expect = 7e-15 Identities = 105/137 (77%), Gaps = 2/137 (1%) Strand=Plus/Minus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| ||||||||||| | || || || || || |||||||| || | || || Sbjct 1747140 GGGGAAAGGGTGGTAGCCTTTGCTGCTGTAGAAGGGATTTTCTTCTCTGGATCTTTTGCT 1747081 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||||| ||| ||| |||| | ||||| ||||| || || || |||||||| Sbjct 1747080 GCTATATTCTGGCTAAAGAAGAGAGGTCTT-ATGCCGGGACTTACTTTTTCCAACGAACT 1747022 Query 42815 CATCAGCAGGGACGAGG 42831 ||||||||| || |||| Sbjct 1747021 CATCAGCAGAGATGAGG 1747005 >seq205 Length=6054944 Score = 86.0 bits (94), Expect = 1e-11 Identities = 166/245 (68%), Gaps = 5/245 (2%) Strand=Plus/Minus Query 42612 TTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAACTGG 42671 || || | ||| || ||||| || || || ||||||||||| || ||||| | | ||| Sbjct 2461515 TTTAATGTCATTGAAACGATACCTTGTATGAAGAAGAAGGCAGATTGGGCCTTGCATTGG 2461456 Query 42672 ATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGC 42731 || | | || || || | || ||| | ||||||||| | | || || || Sbjct 2461455 ATTGGGGACAAAGAAGCTACCTATGGAGAGCATGTTGTAGCCTTTGCAACAGTGGAAGGA 2461396 Query 42732 ATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGATGCCC 42791 ||||||| || | | || | || || |||||||||||| || | | | ||| Sbjct 2461395 GTCTTCTTTTCTGATTCTTTTGTATCAATGTTCTGGCTCAAGAAGCAAG-----AAGCCT 2461341 Query 42792 GGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTTTGCC 42851 || || || || || || ||||| ||||||| || ||||| |||| | ||||||||| Sbjct 2461340 GGTCTGACATTTTCCAATGAACTTCTCAGCAGAGATGAGGGTTTGCACTGTGACTTTGCC 2461281 Query 42852 TGCCT 42856 ||||| Sbjct 2461280 TGCCT 2461276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944097213080000