Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq143 98.7 1e-15
seq53 98.7 1e-15
seq99 96.9 3e-15
seq281 95.1 1e-14
seq451 93.3 4e-14
seq126 87.8 2e-12
seq66 86.0 6e-12
seq31 86.0 6e-12
seq78 84.2 2e-11
seq71 82.4 8e-11
>seq143
Length=9160510
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | |||||||| || || || | | | || || || || ||||||||||| |
Sbjct 9115223 CCTCCCCTCAAACGCAGGACCAAGTGCAGGGTAGATTCTTTCTGGATGTTGTAGTCAGAC 9115164
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || ||| ||| || || ||||| || | | |||| | | ||| ||||| |||||
Sbjct 9115163 AGTGTGCGCTTGTCTTCCAGCTGTTTCCCAGCAAAGATCAATCTCTGCTGGTCAGGAGGG 9115104
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
|| ||||||||||| ||| | |||| ||| | | || | |||||| | | ||| ||
Sbjct 9115103 ATGCCTTCTTTGTC-TTGAATCTTTGCTTTGACATTCTCAATGGTGTCACTGGGCTCTAC 9115045
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | || |||||||||| ||||| || || ||||||||
Sbjct 9115044 TTCAAGGGTAATGGTCTTACCAGTCAAGGTTTTCACGAAGATCTGCAT 9114997
>seq53
Length=19262973
Score = 98.7 bits (108), Expect = 1e-15
Identities = 138/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || ||||||||||| | ||| || ||||| || |||||||| | |
Sbjct 11236682 GACTCCTTCTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTACCTGCA 11236741
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || |||||||| ||||| || || ||||| || ||||| |||||| ||| |
Sbjct 11236742 AAAATCAGACGCTGCTGGTCAGGGGGAATACCCTCCTTGTCTTGGATTTTGGCTTTGACA 11236801
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || || || ||||| | ||
Sbjct 11236802 TTCTCGATGGTGTCACTGGGCTCCACCTCAAGAGTGATGGTCTTGCCTGTCAGGGCCTTC 11236861
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 11236862 ACAAAGATCTGCAT 11236875
>seq99
Length=12215380
Score = 96.9 bits (106), Expect = 3e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| ||||| || | || | | | ||||| || || |||||||||||
Sbjct 7048508 GCCACCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 7048449
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| | ||||| || | |||||| | | | || ||| |||||||||| || ||
Sbjct 7048448 GAGAGTGCAGTCATCCTCCAGCTATTTACCAGCAAAAATCAGATGCTGTTGGTCAGGGGG 7048389
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| |||||| ||| | | || | |||||| | ||||||
Sbjct 7048388 GATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGAGCTCCAC 7048329
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || ||||| || |||||||| ||||||||
Sbjct 7048328 CTCAAGAGTGATGGTCTTGCCCGTCAGGGTCTTTACAAAGATCTGCAT 7048281
>seq281
Length=3633602
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| |||| || ||| | || | || | | | || || || || |||||||| || |
Sbjct 126480 CCCCCTCTCAGACGAAGGACCAGGTGCAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 126539
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| |||||| || || |||||||| || | | |||| | | ||| ||||| || ||
Sbjct 126540 AGAGTACGGCCATCTTCCAGTTGTTTCCCAGCAAAGATCAATCTCTGCTGGTCAGGGGGG 126599
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
|| ||||||||||| ||| ||| || | | || | |||||| | | ||| |||
Sbjct 126600 ATGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 126659
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || | |||||||| || |||||||| ||||| ||||||||
Sbjct 126660 TCAAGGGTAATAGTTTTACCCGTGAGAGTTTTCACAAAGATCTGCAT 126706
>seq451
Length=1225386
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
||||| || | ||||||||||| | ||| || ||||| || |||||||| | |
Sbjct 1000180 GACTCTTTCTAGATGTTGTAGTCTGAGAGAGTGCGGCCATCCTCCAGCTGTTTACCCGCA 1000239
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
| || |||||||| ||||| || || ||||| || ||||| |||||| ||| |
Sbjct 1000240 AAAATCAGACGCTGCTGGTCAGGGGGGATACCCTCCTTGTCTTGGATTTTGGCTTTGACA 1000299
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | | ||||||||| | || | || || || ||||| || ||
Sbjct 1000300 TTCTCTATGGTGTCACTAGGCTCCACCTCAAGAGTAATGGTCTTGCCTGTCAGGGTCTTC 1000359
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 1000360 ACAAAGATCTGCAT 1000373
>seq126
Length=9965562
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| ||||| || | || | | | ||||| || || |||||||||||
Sbjct 8584646 GCCACCACGCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGA 8584705
Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506
| ||| || ||||| || ||| |||| | | || ||| |||| ||||| || ||
Sbjct 8584706 GAGAGTGCGGCCATCCTCCAGCTGTGTACCCTCAAAAATCAGATGCTGCTGGTCAGGGGG 8584765
Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566
||||| || ||||| |||||| ||| | | || | |||||| | | ||||||
Sbjct 8584766 GATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCACTGGGCTCCAC 8584825
Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||| | || | || || || |||| || || ||||| ||||||||
Sbjct 8584826 CTCAAGAGTGATGGTCTTGCCTGTCAAGGTCTTCACAAAGATCTGCAT 8584873
>seq66
Length=17239560
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 138395 GCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTAC 138454
||| ||||| || | || | | | ||||| || || ||||||||||| | ||| |
Sbjct 7151403 GCAGACGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTTC 7151344
Query 138455 GCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTT 138514
| ||||| || |||||||| | | | || ||||| || ||||| || | ||||| |
Sbjct 7151343 GGCCATCCTCCAGCTGTTTACCCGCAAAAATCAGACGTTGCTGGTCAGGGAGGATACCCT 7151284
Query 138515 CTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCG 138574
| ||||| |||||| ||| | | || | | |||| | | ||||||||| | |
Sbjct 7151283 CCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGATGTCACTGGGCTCCACCTCAAGAG 7151224
Query 138575 TCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
| | || || || ||||| || || ||||| ||||||||
Sbjct 7151223 TGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 7151184
>seq31
Length=26307832
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/230 (69%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446
||| || |||| ||||| ||| | | | | | ||||| || || |||||||||| ||
Sbjct 23303231 GCCACCACGCAGACGCAGAACCAGGGGCAGGGTGGACTCTTTCTGGATGTTGTAGT--CT 23303288
Query 138447 CATAGTACGCG--AGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGA 138504
| || | ||| ||||| || ||||||| | | | || |||||||| ||||| |
Sbjct 23303289 GAGAGAATGCGGACATCCTCCAGCTGTTTACTCGCAAAAATCAGACGCTGCTGGTCAGTG 23303348
Query 138505 GGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCC 138564
|| ||||| || ||||| |||||| ||| | | | | |||||| | | ||||
Sbjct 23303349 GGGATACCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTGGATGGTGTCACTAGGCTCC 23303408
Query 138565 ACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
||||| | || | | || || ||||| || || ||||| ||||||||
Sbjct 23303409 ACCTCAAGGGTAATGGGCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 23303458
>seq78
Length=14163838
Score = 84.2 bits (92), Expect = 2e-11
Identities = 151/221 (68%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 138394 CGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTA 138453
|||| ||||| || | ||| | | | ||||| || || ||||||||||| | |||
Sbjct 4568731 CGCAGACGCAGCACCAGATGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTG 4568790
Query 138454 CGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCT 138513
|| ||||| | |||||||| | | | || |||||||||| ||| || | |||||
Sbjct 4568791 CGGCCATCCTCCTGCTGTTTACCCGCAAAAATCAGACGCTGTTTGTCAGGGAGGATACCC 4568850
Query 138514 TCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACC 138573
| ||||| |||||| ||| | | | | |||||| | | |||||||||
Sbjct 4568851 TACTTGTCTTGGATTTTGGCTTTGATATTCTGGATGGTGTCACTGGGCTCCACCTCAGGA 4568910
Query 138574 GTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | || || || ||||| || || ||||| ||||||||
Sbjct 4568911 GTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 4568951
>seq71
Length=15614055
Score = 82.4 bits (90), Expect = 8e-11
Identities = 156/229 (68%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| || | |||||||| | | || || | | | || || ||||| ||||||||||| |
Sbjct 4796079 CCTCCCCTCAAACGCAGAGCCAAGTGCAGGGTAGATTCTTTTTGGATGTTGTAGTCAGAC 4796020
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| ||| || || || || | ||| || | | |||| | | ||| ||||| || ||
Sbjct 4796019 AGTGTATGCCCATCTTCCAGCTTTTTCCCAGCAAAGATCAACCTCTGCTGGTCAGGGGGG 4795960
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
| ||||||||||| ||| ||| || | | || | |||||| | | ||| |||
Sbjct 4795959 TTGCCTTCTTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTAGTCTCTACC 4795900
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAA--AAATCTGCAT 138614
|| | | | |||||||| || |||||||| |||| | ||||||||
Sbjct 4795899 TCAAGGGCAATAGTTTTACCCGTGAGAGTTTTCACAAAGAGATCTGCAT 4795851
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496135232760000
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