Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq260 235 6e-57
seq4595 199 5e-46
seq1663 185 1e-41
seq205 170 2e-37
seq3 163 3e-35
seq50 131 2e-25
seq131 123 3e-23
seq58 123 3e-23
seq27 114 2e-20
seq1 107 2e-18
seq42 96.9 4e-15
seq201 86.0 7e-12
>seq260
Length=4071714
Score = 235 bits (260), Expect = 6e-57
Identities = 343/479 (72%), Gaps = 7/479 (1%)
Strand=Plus/Minus
Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219
|||||| |||| || ||| ||| | |||| || ||||| |||||||| || || | |||
Sbjct 1909779 ATATTTGAACATTAGACAGGCATAGCCACAGTGCAAACCCTCATCTCTGCTAATAAGTTC 1909720
Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCt-ttttttAATCCAAAATATTGCTGCAA 37278
||| | ||| || | || ||||||| |||| |||||| | ||| |||||| |||||
Sbjct 1909719 ATTGGGAAATGTCAGACCAGGCATTAGTCCTCGCTTTTTTGAGCCAGGATATTGATGCAA 1909660
Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG 37338
|||| | |||||||||||| ||||| | ||||||||| ||||||| ||| ||| | |
Sbjct 1909659 AAGAACTAGAAAAGAAAATTCCTTCCATTGCTGCAAAGGCTACAACACGCT--CCGCATG 1909602
Query 37339 TTGAACTA--TAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTC 37396
| || | || |||||| | |||||||||||| ||||||||
Sbjct 1909601 GGTAGCTTCTTTGTCCCCAATCCAGCGCAAGGCCCAATCTGCCTTCTTCTTAACACAAGG 1909542
Query 37397 AATTGTTTCAATTGCTTTTAAGAGAAAGttt-ttttCTTCACTATCTGTTATATAAGTAT 37455
| ||| |||| || || |||||||| | ||||||| | | || | || ||||| |
Sbjct 1909541 CAGCGTTCCAATGGCATTAAAGAGAAATTCCCTTTTCTT-AGAAACTTTAATGTAAGTGT 1909483
Query 37456 CAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAA 37515
|||| || | ||||||||||||||| || || |||||||| | || || || ||||| |
Sbjct 1909482 CAATAAGGAGACTATACATTTCAGAATGTATGTTTTCAATGGAAATTTGGAAGCCATAGA 1909423
Query 37516 AACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAA 37575
|||| | ||||| | | ||||| || | ||| | || | ||||||||||| |
Sbjct 1909422 AACAGCAGGCTTCTGTAACATGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTCA 1909363
Query 37576 CTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCA 37634
|||| |||||| | ||||||||||| || || || ||| ||| || ||||| || |||
Sbjct 1909362 CTATGCCATCATTTGCTGCAAAGAATGCCAGTACGTATGATATGAAGTGTCTGTCCTCA 1909304
>seq4595
Length=7281
Score = 199 bits (220), Expect = 5e-46
Identities = 308/436 (71%), Gaps = 3/436 (1%)
Strand=Plus/Minus
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
||| |||| || || |||| ||||| || ||||| ||| |||| || || | ||||||
Sbjct 6620 TTTGAACACTAGGCAAGCAATGTCACAGTGCAAACCCTCACCTCTGCTAATAAGTTCATT 6561
Query 37223 AG-AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAG 37281
| |||| || | || ||||| | ||| ||| || | ||| ||||||| ||||||||
Sbjct 6560 TGGAAAATGTCAGACCAGGCATAAGTTCTCATTTCTTGAGCCAGAATATTGATGCAAAAG 6501
Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTG 37341
| ||||||||||| || ||||| ||||||||||| ||||||| || | || | || |
Sbjct 6500 AACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCTACAACAC-ACTCCCCATAGGTA 6442
Query 37342 AACT-ATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATT 37400
| | | || |||||| |||||||||||| || ||||| ||
Sbjct 6441 ATTTCTTTGTCTCCAATCCAGCGCAAGACCCAATCTGCCTTCTTCTTCACACAAGGCATC 6382
Query 37401 GTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATT 37460
||||||| || || |||||||| | |||| | | |||| | | || ||| |||||
Sbjct 6381 ATTTCAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTCAAATCAGTGTCAATA 6322
Query 37461 AGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACAC 37520
|| | ||||||||||||||| || || ||||| || | || || || ||||| |||||
Sbjct 6321 AGGAGACTATACATTTCAGAATGTATGTTTTCCATGACAATTTGGAAGCCATAGAAACAG 6262
Query 37521 CTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATC 37580
|| ||||| | | |||||| || | ||| || | ||||||| ||| |||||
Sbjct 6261 CTGGCTTCTGTAATTTGAACTTCTTGGCTAAATTGCTCCACGAAGTTTTTATTCACTATG 6202
Query 37581 CCATCACTAGCTGCAA 37596
|||||||| |||||||
Sbjct 6201 CCATCACTTGCTGCAA 6186
>seq1663
Length=17039
Score = 185 bits (204), Expect = 1e-41
Identities = 510/767 (66%), Gaps = 31/767 (4%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAA--CTCGTCTTTCGAAAAAATTTGTCTTTCCT 36929
||| ||||||||||| |||||||| || ||||||| | | || || ||||| |||
Sbjct 3196 CATCACTCCCATTTTCTGATATTCGCCTGTTCTCGTCTCAC--AGAAGTTAGTCTTCCCT 3139
Query 36930 TCTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACAT 36989
| ||||| | ||| ||||| || ||||||||||| | ||| | || || || |
Sbjct 3138 TTCAGTGAAACATTCTCCATGAAGTCAAATGGATTTTCTACTTTAAACATCTTATTAAAA 3079
Query 36990 GATAATTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTA--GTTCAT 37047
| |||| || | || || || || ||||| ||||| ||||| || ||
Sbjct 3078 CCCAGTTCCAGCATTACTCTGTCTGCCACGAATTCAATGTACCGCTTCATTAAAGTGCAA 3019
Query 37048 AGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTA 37107
|| || || || | || || || | || || | ||||| | | || |||| |
Sbjct 3018 --TTCATTCCGATATGCTTCACAGGCAAGGCCTCGTAAAGAACTTCTGTT-CTATCCCAA 2962
Query 37108 CAGCATCTTTAACTATATTAACAATAACT-TCT--TCAGTTGGGGGATATTTTAAATATT 37164
|||||| ||| ||| | | | ||| ||| || | || | | | | ||
Sbjct 2961 CAGCATTAATAATTATTT---CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTT 2905
Query 37165 TAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAG 37224
| ||| || ||| ||||| ||||| || ||||| |||||||| || || | |||||| |
Sbjct 2904 TGAACGTTAGACAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGTTCATTGG 2845
Query 37225 AAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATC 37284
|||| || | || ||||||| ||| || | || ||| | || || ||||||||| |
Sbjct 2844 AAAATGTCAGACCAGGCATTAGTCCTGGCTTCTCAAGCCAGATTACTGATGCAAAAGAAC 2785
Query 37285 CAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACA-AGACGTGTACCGAAAGTTGAA 37343
||||||||| || ||||| ||||||||||| | |||| || ||| | |
Sbjct 2784 CAGAAAAGACGATTCCTTCCACTGCTGCAAAGG-TACATAG----GTAGCTTCTTTGTCC 2730
Query 37344 CTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTT 37403
||| | |||| | || | |||||||||||| || ||||| ||| ||
Sbjct 2729 CTA-ATTCAGCA---CAAG-----GCCCAATCTGCCTTCTTCTTCACACAAGGAATCTTT 2679
Query 37404 TCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGT 37463
| ||| || || |||||||| | |||| | | |||| | || ||||| ||||| ||
Sbjct 2678 TAAATGGCATTAAAGAGAAATTCCCTTTCCTTAGAATCTTTAATGTAAGTGTCAATAAGG 2619
Query 37464 AAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTA 37523
| ||||||||||||||| || || ||||| || || || || || ||||| ||||| |
Sbjct 2618 AGACTATACATTTCAGAATGTATGTTTTCCATGGCAATTTGGAAGCCATAGAAACAGC-G 2560
Query 37524 GCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCA 37583
| ||| | | ||| || | | ||| | || | || |||||||| ||||| ||
Sbjct 2559 GGTTCTGTAATTTGGACTTTTTGGCTAAATCGCTCCACCAACTTTTCATTTACTATGGCA 2500
Query 37584 TCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTC 37630
||||| || || ||||| || || |||| | ||| |||| ||| ||
Sbjct 2499 TCACTTGCCGCTAAGAACGCCAGTACATGTGATATGAAATCTCTCTC 2453
>seq205
Length=6054944
Score = 170 bits (188), Expect = 2e-37
Identities = 489/743 (66%), Gaps = 33/743 (4%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| ||||||||| | |||||||| | |||| |||| || | || || |||||||||
Sbjct 2460975 CATCACTCCCATTCTCTGATATTCACTTACTC-TCTTCTCAGAGAAGTTACTCTTTCCTT 2461033
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATG 36990
| ||||| ||||| ||||| || ||||||||| | || || | | || | ||
Sbjct 2461034 CCAGTGAAATATTCTCCATGAAGTCAAATGGACT-------TTCTACTTTGAACACCCTG 2461086
Query 36991 ATAA-------TTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTA-- 37041
||| |||| ||| || || || || ||||| ||||| | |||||
Sbjct 2461087 TTAAAACCCAGTTCCATCATTAGTCTGTCTGCCTTGAATTCAATGTACTACTGCATTAAA 2461146
Query 37042 GTTCATAGTTTATACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTA 37101
|| || || || || || || || || || | || || ||| || | |||||
Sbjct 2461147 GTGCAA--TTCATTCCGATAAGCTTCACAGGCAAGGCCTCAGTAAGTAACTCCTGTTCTA 2461204
Query 37102 TTATTACAGCATCTTTAACTATATTAACAATAACT-TCTTCAGTTGGGGGATATTTTAAA 37160
| | ||||||| ||| ||| | | | ||| ||| | || || | | | ||
Sbjct 2461205 TCCTAACAGCATTAATAATTATTT---CTTTTACTCTCTGCTCTTAAGGTTTTTGTAGAA 2461261
Query 37161 --TATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATT 37218
| ||| ||| || || ||||| ||||| || ||||| |||||||| || | | ||
Sbjct 2461262 GGTGTTTGAACGTTAGGCAGGCAAAGTCACAGTGCAAACCCTCATCTCTGCTGAGAAGTT 2461321
Query 37219 CATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAA 37278
|||| ||||| || | || ||| | || || || | ||| || |||| | |||
Sbjct 2461322 CATTGGAAAATGTCAGACCAGGCTT-----CTTGCTTCTTGAGCCAGAACATTGATACAA 2461376
Query 37279 AAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAG 37338
|||| |||||||||| | ||||| |||| |||||| ||||||| | | || | |
Sbjct 2461377 AAGAATCAGAAAAGAAGACTCCTTCCACTGTTGCAAAGGCTACAACATGCTCTCCATAGG 2461436
Query 37339 TTGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAA 37398
| | | || |||||| | | |||||||||||| || | ||| |
Sbjct 2461437 TAGCTTCTTTGTCCCCAATCCAATGCAAGGCCCAATCTGCCTTCTTCTTCATACAAGGTA 2461496
Query 37399 TTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAA 37458
| |||||||| | || |||| ||| | |||| | | |||| | | ||||| |||
Sbjct 2461497 TCGTTTCAATGACATTAAAGAAAAATTCCCTTTCCTTAGGATCTTTAGTGTAAGTGCCAA 2461556
Query 37459 TTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAAC 37518
| || | ||||||||||||||| || || |||| || || || || || ||||| ||||
Sbjct 2461557 TAAGGAGACTATACATTTCAGAATGCATGCTTTCCATGGCAATTTGGAATCCATAGAAAC 2461616
Query 37519 ACCTAGCTTCAGATAAT-TGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACT 37577
| | |||| | |||| ||||| | | ||| || | ||||||||||| |||
Sbjct 2461617 AGCAGACTTCTG-TAATCTGAACTTTTTGGCTAAATTGCTCCACCAAGTTTTCATTCACT 2461675
Query 37578 ATCCCATCACTAGCTGCAAAGAA 37600
|| |||||||| |||||||||||
Sbjct 2461676 ATGCCATCACTTGCTGCAAAGAA 2461698
>seq3
Length=52730029
Score = 163 bits (180), Expect = 3e-35
Identities = 459/699 (66%), Gaps = 12/699 (2%)
Strand=Plus/Plus
Query 36826 TTTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTATTCATAACTCCCATTT 36885
|||| || || |||| || ||||| | | || || ||| ||| |||||||| |
Sbjct 13968516 TTTAGAAGTCAGCATCCAAGGTAAAATAATTCTCTGTAGGACTTGACATCACTCCCATCT 13968575
Query 36886 TTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTT 36945
| |||||||| || |||| | | || | || || |||| ||||| ||||| |||| |
Sbjct 13968576 TCTGATATTCGCCTACTCTTTTCTCACAGAAGTTAGTCTGCCCTTCCAGTGAATTATTCT 13968635
Query 36946 CCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAATTCCTTCAGAA 37005
|||| || ||||||||||| | || | || || || | | |||| ||
Sbjct 13968636 CCATGAAGTCAAATGGATTTTCTACTTTGAACATCTTATTAAAACCCAGTTCCAGCATTG 13968695
Query 37006 GCCTATCCGCAACAAATTCTATGTATTTACACATTA--GTTCATAGTTTATACCAATTAG 37063
| || || || |||||||| ||||| ||||| || || || || || || |
Sbjct 13968696 GTCTGTCTGCCACAAATTCAATGTACCACTTCATTAAAGTGCAA--TTCATTCCGATAAA 13968753
Query 37064 TTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTAT 37123
||| || || | || || |||||| | ||||| | ||||||| ||| |||
Sbjct 13968754 TTTCACAGGCAAGGCCTCAGTAAGAAACTCCTATTCTAGCCTAACAGCATTAATAATTAT 13968813
Query 37124 ATTAACAATAACT-TCT--TCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGC 37180
| | | ||| ||| || | || | | | | ||| |||| || || ||
Sbjct 13968814 TT---CTTTTACTCTCTGCTCCGAAGGTTTGTGTAGCAGGTGTTTGAACATTAGGCAGGC 13968870
Query 37181 AAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGG 37240
||| ||||| || ||||| |||||||| || || | ||||| ||||| || | || ||
Sbjct 13968871 AAAGTCACAGTGCAAACCCTCATCTCTGCTAATAAGGTCATTGGAAAATGTCAGACCAGG 13968930
Query 37241 CATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACC 37300
|||| |||| || || | ||| ||||||| |||||| || |||||| |||| || |
Sbjct 13968931 CATTGGTCCTCACTTATTGAGCCAGAATATTGATGCAAATGAACCAGAATAGAAGATTCT 13968990
Query 37301 TTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360
||| ||||||||||| ||| ||| ||| || | || | | || | ||||
Sbjct 13968991 TTCCACTGCTGCAAAGGCTCCAACACGATCCCCATATGTAGCTTCTTTGTCCCCAGTCCA 13969050
Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAG 37420
| ||||||||| || || ||||| || ||||||| || || |||||
Sbjct 13969051 GCCCAAGGCCCAATCTGCTTTCCTCTTCACACAAGGCATCCTTTCAATGGCATTAAAGAG 13969110
Query 37421 AAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGA 37480
||| | | || | | || | || ||||| ||||| || | |||||||||||||||
Sbjct 13969111 AAATTCCCTGTCCTTA--GACTTTAATGTAAGTGTCAATAAGGAGACTATACATTTCAGA 13969168
Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519
|| || ||||| || || || || || ||||| |||||
Sbjct 13969169 ATGTATGTTTTCCATGGCGATTTGGAAGCCATAGAAACA 13969207
>seq50
Length=19932738
Score = 131 bits (144), Expect = 2e-25
Identities = 285/422 (68%), Gaps = 5/422 (1%)
Strand=Plus/Minus
Query 37194 AAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtt 37253
||| | |||||||| || || | |||||| ||||| || | || ||||||| ||||
Sbjct 2662989 AAAGCCTCATCTCTGCTAATAATTTCATTGGAAAATGTGAGGCCAGGCATTAGCCCTCAC 2662930
Query 37254 tttttAATCCAAAATATTGCTGCAAAAGATC-CAGAAAAGAAAATACCTTCAACTGCT-- 37310
|| || | | || |||| ||||||| | |||||||||| | ||||| |||| |
Sbjct 2662929 TTCTTGAGGTAGAACATTGATGCAAAAAAAATCAGAAAAGAAGACTCCTTCCACTGTTTT 2662870
Query 37311 GCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTC 37370
||||| || | || ||| | | ||| | || | |||| | |
Sbjct 2662869 GCAAAGGCAAAAACACGCTCCCTGTCCATTGCTTCTTTGTCCCTAGTCCAGCACAAGGCC 2662810
Query 37371 CAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttt 37430
||||||| || || ||||| ||||||||||| | | |||||||| | ||
Sbjct 2662809 CAATCTGATTTCTTCTTTACACAAGGCATTGTTTCAATGCCACTGAAGAGAAACTCCCTT 2662750
Query 37431 tCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTT 37490
|| | |||| | || ||||| ||||| || | ||||||||||| ||| | || | |
Sbjct 2662749 TCCCTAGAATCTTTAATTTAAGTGTCAATAAGGAGACTATACATTTTAGAAAGTATGTGT 2662690
Query 37491 TCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGAACATCGTTAAA 37549
|| || || || || || |||| ||||| | ||||| ||||| ||||| ||||
Sbjct 2662689 TCCATGGCAATTTGGAAGTCATAGAAACAGCGGGCTTCT-ATAATCTGAACTTCGTGGCT 2662631
Query 37550 AAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAAC 37609
||| | || | ||||||||||| ||||| |||||||| |||||||| || || || ||
Sbjct 2662630 AAATCACTCCACCAAGTTTTCATTCACTATGCCATCACTTGCTGCAAATAATGCCAGTAC 2662571
Query 37610 AT 37611
||
Sbjct 2662570 AT 2662569
>seq131
Length=9795181
Score = 123 bits (136), Expect = 3e-23
Identities = 104/128 (81%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||||||||| || | || ||||||| |||| || ||
Sbjct 9778494 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 9778553
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||||| ||||||||| ||||||||||| || ||||| ||||||||||| |||
Sbjct 9778554 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 9778613
Query 37320 ACAAGACG 37327
|||| |||
Sbjct 9778614 ACAACACG 9778621
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/94 (81%), Gaps = 2/94 (2%)
Strand=Plus/Plus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| |||||||| | |||||||| || |||| |||| || || || || ||||| ||||
Sbjct 9777473 CATCACTCCCATCCTCTGATATTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 9777531
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| ||||| ||||| ||||| || |||||||||||
Sbjct 9777532 CCAGTGAAATATTCTCCATGAAGTCAAATGGATT 9777565
>seq58
Length=18876681
Score = 123 bits (136), Expect = 3e-23
Identities = 104/128 (81%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | |||||||||||| || | || ||||||| |||| || ||
Sbjct 18847691 TCATCTCTGCTAATAAGTTCATTAGAAAATGTCAGACCAGGCATTAGTCCTCGCTTCTTG 18847632
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||||| ||||||||| ||||||||||| || ||||| ||||||||||| |||
Sbjct 18847631 AGCCAGAATATTGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCTGCAAAGGCT 18847572
Query 37320 ACAAGACG 37327
|||| |||
Sbjct 18847571 ACAACACG 18847564
Score = 82.4 bits (90), Expect = 9e-11
Identities = 76/94 (81%), Gaps = 2/94 (2%)
Strand=Plus/Minus
Query 36872 CATAACTCCCATTTTTTGATATTCTCCAACTCGTCTT-TCGAAAAAATTTGTCTTTCCTT 36930
||| |||||||| | |||||||| || |||| |||| || || || || ||||| ||||
Sbjct 18848712 CATCACTCCCATCCTCTGATATTCGCCTACTC-TCTTCTCAAAGAAGTTAGTCTTCCCTT 18848654
Query 36931 CTAGTGATATATTTTCCATAAAATCAAATGGATT 36964
| ||||| ||||| ||||| || |||||||||||
Sbjct 18848653 CCAGTGAAATATTCTCCATGAAGTCAAATGGATT 18848620
>seq27
Length=27113625
Score = 114 bits (126), Expect = 2e-20
Identities = 124/162 (77%), Gaps = 2/162 (1%)
Strand=Plus/Plus
Query 37163 TTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATT 37222
|||||||| || || ||||| ||||| || ||||| |||||||| || || | ||||||
Sbjct 23269031 TTTAAACATTAGGCAGGCAAAGTCACATTGCAAACCCTCATCTCTGCTAATAAGTTCATT 23269090
Query 37223 AGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAA-G 37281
||||| || | | |||||||| ||| || || | ||| || ||| || |||| |
Sbjct 23269091 GGAAAATGTGAGACA-GGCATTAATACTCACTTATTGAGCCAGGATGTTGATGAAAAAAG 23269149
Query 37282 ATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAA 37323
| ||||||||||| || | ||| ||||||||||| |||||||
Sbjct 23269150 AACCAGAAAAGAAGATTCTTTCTACTGCTGCAAAGGCTACAA 23269191
>seq1
Length=63721086
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 37200 TCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttA 37259
|||||||| || || | ||| || ||||| || | ||| ||||| | |||||| || ||
Sbjct 1747007 TCATCTCTGCTGATGAGTTCGTTGGAAAAAGTAAGTCCCGGCATAAGACCTCTCTTCTTT 1747066
Query 37260 ATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCT 37319
| ||| ||||| || |||||||||||||| |||||||| ||||| || || ||||| |||
Sbjct 1747067 AGCCAGAATATAGCAGCAAAAGATCCAGAGAAGAAAATCCCTTCTACAGCAGCAAAGGCT 1747126
Query 37320 AC 37321
||
Sbjct 1747127 AC 1747128
Score = 86.0 bits (94), Expect = 7e-12
Identities = 65/77 (84%), Gaps = 0/77 (0%)
Strand=Plus/Plus
Query 36888 TGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTTTCC 36947
|||||||| ||||||| |||| || |||||||| |||||||| | || |||||||||
Sbjct 1725773 TGATATTCGGAAACTCGTTTTTCAAAGAAATTTGTTTTTCCTTCCAAAGAAATATTTTCC 1725832
Query 36948 ATAAAATCAAATGGATT 36964
||||||||||| |||||
Sbjct 1725833 ATAAAATCAAAGGGATT 1725849
>seq42
Length=21960898
Score = 96.9 bits (106), Expect = 4e-15
Identities = 117/156 (75%), Gaps = 10/156 (6%)
Strand=Plus/Minus
Query 37180 CAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTG 37239
|||| ||||||||||||| ||||||| || || |||| ||| ||||| || || || |
Sbjct 1724837 CAAAGCCACAATGTAAACCCTCATCTCAGCTAATAAATTAATTGGAAAATGTGAACCCAG 1724778
Query 37240 GCATTAAACCTCtttt------tttAATCCAAAATATTGCTGC--AAAAGATCCAGAAAA 37291
||||||| || ||| |||||||| ||||| ||| |||||| ||||||||
Sbjct 1724777 GCATTAATTCTTGTTTCCAGGCATTAATCCAGAATATCAATGCAGAAAAGAACCAGAAAA 1724718
Query 37292 GAAAATACCTTCAACTGCTGC-AAATGCTACAAGAC 37326
||| || ||||| | ||||| |||||| |||| ||
Sbjct 1724717 GAAGATTCCTTCTGCAGCTGCAAAATGC-ACAATAC 1724683
>seq201
Length=5903822
Score = 86.0 bits (94), Expect = 7e-12
Identities = 179/264 (68%), Gaps = 2/264 (1%)
Strand=Plus/Minus
Query 37372 AATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGttttttt 37431
|||||||||| || ||||| ||||||||||| || | |||| ||| | ||||
Sbjct 3664485 AATCTGCCTTCTTCTTCACACAAGATATTGTTTCAATGGCATCAAAGACAAATTCCTTTT 3664426
Query 37432 CTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTT 37491
| | |||| | || ||||| ||| | | ||||| |||||||| | || || |
Sbjct 3664425 CCTTGTAATCTTTAATGTAAGTGTCATTACAGATACTATGTATTTCAGAATATATGTTAT 3664366
Query 37492 CAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAAT-TGAACATCGTTAAAA 37550
| || | || || || ||| | ||||| ||||| | |||| ||| || | |
Sbjct 3664365 CCATGGTAATTTGGAAGCCAAAGAAACAGTGGGCTTCTG-TAATCTGAGTTTCTTGGCTA 3664307
Query 37551 AACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACA 37610
|| | || ||||||||||||| ||||| |||| || ||||||||||| | || ||
Sbjct 3664306 AATCACTCCACTAAGTTTTCATTCACTATGCCATTCCTTGCTGCAAAGAACACCAGTGCA 3664247
Query 37611 TATTTTATAAAATGTCTTTCATCA 37634
||| |||||| | | | || |||
Sbjct 3664246 TATGATATAAAGTATTTCTCCTCA 3664223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592165018820000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |