Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq61 84.2 6e-12 >seq61 Length=18009331 Score = 84.2 bits (92), Expect = 6e-12 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 958 TTCCATATGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGA 1017 |||| | ||| |||||||| ||| ||||||| | || || || || || || | | Sbjct 12317215 TTCCTTCTGGGTGTTATGGAAGAGTAGCTCCGTGTTCTGGCTTGGCTGCAAAACACTTCA 12317156 Query 1018 TTGATGTGGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTAT 1077 | ||||| || |||||||| |||||| ||| | ||| | ||||||||||||| ||| Sbjct 12317155 TAGATGTAGGAGCTGGTGTCATTGATGAAGATTATAGAGAATACGTTGGTGTTGTACTAT 12317096 Query 1078 TTAATTTTAGC 1088 |||||||| || Sbjct 12317095 TTAATTTTGGC 12317085 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138647839698000