Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_020474.2
Length=180421
Score E
Sequences producing significant alignments: (Bits) Value
seq14 340 2e-88
seq61 190 2e-43
seq5 147 3e-30
seq84 98.7 1e-15
>seq14
Length=34905451
Score = 340 bits (376), Expect = 2e-88
Identities = 670/985 (68%), Gaps = 11/985 (1%)
Strand=Plus/Minus
Query 160052 CAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTTCGTCGAATTTATTTGC 160111
||||||||| |||| |||||| | ||| || | ||||||||| ||| || || || ||
Sbjct 23451836 CAGATGTTCATCCAAACATTGAATGGCAAAGAAATCAACGTCTGTGTCAAACTTGTTGGC 23451777
Query 160112 GAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGGACCCGAACACGCAGAC 160171
|||| ||||| || ||| ||||||| || || || | ||| || ||||| ||
Sbjct 23451776 AAACAAGTGGTGT---TTGCGTAACATCCAGTTCAAATCCCCTGCCCCAAAAACGCACAC 23451720
Query 160172 GGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTTTCGCCACGTCACCTTC 160231
||| || | || | ||| |||| || ||||| | || || || | || || |||||
Sbjct 23451719 GGAGCGCACATGGATGCCACTGCAGGGTGGGTAGGGGGCGCCCTTGGAAACATCGCCTTC 23451660
Query 160232 GTAGTACTGCCACTTCACAAACCTGGCTATCGCCTGCATGTCGGAGGTGTCGTATTTGTA 160291
|||| ||||| || |||||||| || | ||| |||||||| || ||||||||||| |
Sbjct 23451659 AAAGTAGTGCCATTTGACAAACCTTGCAAACGCGTGCATGTCAGATGTGTCGTATTTATC 23451600
Query 160292 CATCAGGGGAACGGCACCGGGAACGCCGGGCATACGCTGTAGGGTGGCCCACAGGTGTTC 160351
| || | || || || ||| | || || | || | ||||||||||| | |||
Sbjct 23451599 GTTTGAAGGGAGTGCGCCAGGGACGTCTGGAATCCTTTGAATAGTGGCCCACAGATATTC 23451540
Query 160352 GTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTCTCCGA---TTAACCTGTCCCG 160408
|||||||| || ||||| || | ||| ||||| |||| || || || | | | |
Sbjct 23451539 ATCGGGGCTATAGGTGTCTTTTGCCCACTCCATAAACT-TCTGAATTTTTTCATTTTCT- 23451482
Query 160409 CAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAGTACGCGCTGCCGGAGAATATCGG 160468
|| || | | |||||| || | || ||||| || || ||||| || || || ||
Sbjct 23451481 -AGTACATAACCCACGTAGTTCCTATTGACCACAAAATAGGCACTGCCAGAAAAAATGGG 23451423
Query 160469 TATGGGTATAGGCGG-CGTGTCTTTGTCCTGACCGGTGTTAGACACCACTCCTTTCACCA 160527
| | | ||| || ||| |||||| ||||||||| | | | || || | |
Sbjct 23451422 TGTTTCGAGAGGAGGACGTA-CTTTGTTTGCACCGGTGTTTGTAATCTTCCCATTAATAA 23451364
Query 160528 GCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGGTGGCATGCGTTCCGTCTCTAGAC 160587
| ||| | |||||||| || || | | |||||| ||| || ||||| |
Sbjct 23451363 CTTCAAAGCGCCTTTTCCACCTTTCCTCTTTATAGGCTGGCATTTTTTCAGTTTCTAGGC 23451304
Query 160588 TGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGATCTCTAGGTTCGTCTTGAGCGGAA 160647
| || |||| | ||||| |||| | |||| ||||| ||||| || || | || |
Sbjct 23451303 TATTTTCACCCATTACTGATTTGAGCTTCCTGACAATCTCCAGGTTGGTTTTAATAGGGA 23451244
Query 160648 AGTCGGTACCGCACAAGTTTATCACGTACTTCCATTTCGCGCTCAGGTCGTGCAGGTCCC 160707
| || |||| || | ||||||| ||||||||| | | |||| | || || |||
Sbjct 23451243 AATCCATACCACAAAGATTTATCAAGTACTTCCAGTCTGTACTCATTTTGTAGAGATCCT 23451184
Query 160708 TCATGCAATTAATATCTGCCTGCACGCGGCTCCAGGAAGCGTACACTACGTTCTCTAGTT 160767
||||||| |||| || ||||| || |||||||||||||| || || || |||| || |
Sbjct 23451183 TCATGCAGTTAAGGTCGGCCTGGACTCGGCTCCAGGAAGCATAGACCACAGTCTCCAGCT 23451124
Query 160768 TACTGGCCACAAAGACGTTATCGAAACACGACACGATTCCCACCACCGCCAGAAAGAACA 160827
|||||||||||||| ||| ||| || || | || |||| ||| || | || ||
Sbjct 23451123 GGCTGGCCACAAAGACATTACTGAAGCAGGATGCAATACCCATCACTGCACGTAAAAAGG 23451064
Query 160828 TCTTATCCGCCTTTCGGTCCACGTGCACGCAATACAGGTTCTGAGGCGCGTAGATGGCCC 160887
| ||| | |||| |||||| || | |||||| | ||||||||| |||||||||||
Sbjct 23451063 AATCATCTGACTTTTTGTCCACATGAATGCAATAGAAATTCTGAGGCATGTAGATGGCCC 23451004
Query 160888 TGAGCAACCTCTCGAACATCTCTATCTTATGATGGATCACGATAGAGTAGGCTATCGGAA 160947
| || | ||| || | | || ||||| || || | || | ||| || || || ||||
Sbjct 23451003 TCAGAAGCCTGTCAAGTAGTTCAATCTTGTGGTGAACTACTACAGAATATGCAATTGGAA 23450944
Query 160948 ACTCGGTCTCCTCGCGACTCAGGGACCCGGTCAGGTACTTTCGCGTCTTGATAAAATAAT 161007
|||| | ||| || | || |||| | | || || ||| ||||||| ||| |
Sbjct 23450943 ACTCCGCCTCTTCTTGGCTAAGGGGTTCTACGATATATTTGCGCCTCTTGATGAAAGATG 23450884
Query 161008 CACAATCCCGCGTCATGTTGATATA 161032
|||||| |||||||||||||||
Sbjct 23450883 TACAATCGTTCGTCATGTTGATATA 23450859
>seq61
Length=18009331
Score = 190 bits (210), Expect = 2e-43
Identities = 243/331 (73%), Gaps = 3/331 (1%)
Strand=Plus/Plus
Query 168150 TATAGAGTCAAGCACGTTTTTCCAGAAATCTTGCCTGATCCGAACGTGTTGAAGAGGCAC 168209
|| || || | ||| |||||||| |||||||| || || || || || ||||||||||||
Sbjct 14903414 TAGAGTGTGAGGCAGGTTTTTCCTGAAATCTTCCCAGAACCAAAGGTATTGAAGAGGCAC 14903473
Query 168210 ATGAAGCAGCCTTCGTCCTCCACGGTGGTATTCCAAAATGTTAGCGTTGAGTTTCGGAGG 168269
||| | || || || || |||| |||||||||||| || |||| ||||||| | |||
Sbjct 14903474 ATGTAACACCCCTCATCTTCCAGGGTGGTATTCCAGAAGGTTATGGTTGAGTCGCTGAGT 14903533
Query 168270 CCCAACTGCGTTATGTTCACACGATCTTTATAAGGAGGTTGAACTACAACGCCGTGGTTC 168329
|||| || || ||||| || | | ||| | || ||||| |||| || ||||||
Sbjct 14903534 CCCAGATGTGTGATGTTTACCCTGCCCTTAAAGACCGGCTGAACCTCAACCCCATGGTTC 14903593
Query 168330 TCGCTGAAGGTGGCCATGTTCTCCGGGCTGGTGGCCTTTATCTTCTGCCAGGTTACTATC 168389
| ||||||||| ||||||| || ||||| || ||||| || |||||||| ||||| |||
Sbjct 14903594 TTACTGAAGGTGACCATGTTTTCTGGGCTTGTAGCCTTCATTTTCTGCCATGTTACAATC 14903653
Query 168390 AGAACCTCTTTATCGGTCTGCAGGGAACATCTCAGCGAAGCCGGAGTGTTCAGCAGTTCT 168449
| || || | || || | ||| || || || || || || | || | |||||| |||
Sbjct 14903654 AAGACTTCCTGATGAGTTTTCAGAGAGCAACTTAGGGAGGCTGATGTATGCAGCAGCTCT 14903713
Query 168450 CGCTCA-TCTTGAGTTACGACCTGTCCCTGT 168479
| ||| || || || || || || ||||||
Sbjct 14903714 CTTTCATTCGTG-GTCACCACTTG-CCCTGT 14903742
Score = 141 bits (156), Expect = 1e-28
Identities = 165/222 (74%), Gaps = 3/222 (1%)
Strand=Plus/Plus
Query 167883 GTTTGCCGTATGTCCGTTACAGTTCCCAAATGTAGTACCTTGCATATCACCTCTCCGTTT 167942
|||||| | ||| ||||||| |||| |||||| || ||||| |||||||| ||
Sbjct 14900902 GTTTGCTTGAAGTCTTTTACAGTCCCCAGATGTAGCACTTTGCAGATCACCTCC---TTC 14900958
Query 167943 CCTACTTGACTCTTTGGATCTTTTACTTGTAAAATGCTAGTTACACTTGTAGTTCCATTG 168002
|| || ||||| | || ||| | | || | ||||| || ||| |||||| ||||||
Sbjct 14900959 CCCACCTGACTTTCGGGGTCTCTGATGTGCAGGATGCTCGTGACAGATGTAGTCCCATTG 14901018
Query 168003 CGATGTAAAACGGTTTTCGTGCTGTTCTCAATCCCTGATCCTGCCACCTTCCAGAATATT 168062
| ||| | | | ||| |||||||||||||||||||| || ||||||||||| ||
Sbjct 14901019 GGGTGTGACAGGCTTTCAGTGCTGTTCTCAATCCCTGACCCATCCACCTTCCAGTTGATA 14901078
Query 168063 ACAGGAGCGGGTCGTGCTGTAGCAGAGCAGGTAATATTTAAG 168104
| || || || || || |||||||||||||| |||||||||
Sbjct 14901079 ATGGGGGCTGGACGGGCAGTAGCAGAGCAGGTGATATTTAAG 14901120
>seq5
Length=45607681
Score = 147 bits (162), Expect = 3e-30
Identities = 515/790 (65%), Gaps = 23/790 (3%)
Strand=Plus/Plus
Query 160036 TCAGCGATCTGTGTCGCAGATGTTCGTCCAGACATTGGACGGCGAACACGTCAACGTCTT 160095
|||| | | | || | |||||| || | || |||||||| ||| || | ||||||||
Sbjct 34232790 TCAGAGTTTTATGCCTCAGATGCTCATTCAAACATTGGATGGCAAAGAGATCAACGTCCC 34232849
Query 160096 CGTCGAATTTATTTGCGAACAGATGGTGAGCGTTCTGTAGGATCCAGTGCACGTCTCCGG 160155
|| || || || || |||| |||||| || | || ||||||| || || || |
Sbjct 34232850 TGTGAAACTTGTTGGCAAACAAATGGTGT---TTGCGCAGCATCCAGTTCAAATCCCCTG 34232906
Query 160156 ACCCGAACACGCAGACGGAACGTATGTGCACGCCGTTGCAAGGCGGGTACAGAGCTCCTT 160215
||| || | ||| ||||| | | || | || | ||| ||| |||| | || || |
Sbjct 34232907 CCCCAAAAATGCACACGGAGCACACCTGGATGCTGCTGCTGGGCAGGTAGTGGGCGCCCT 34232966
Query 160216 TCGCCACGTCACCTTCGTAGTACTGCC-ACTTCACAAACCTGGCT-AT-CGCCTGCATGT 160272
| | || |||||||| ||| || | | || ||||| || || || ||| |||||||
Sbjct 34232967 TGGAAACATCACCTTCAAAGTGGTGTCTATTTGACAAATCTTGCAGATGCGCGTGCATGT 34233026
Query 160273 CGGAGGTGTCGTATTTGTACATC--AGGGGAACGGCACCGGGAACGCCGGGCATACGCTG 160330
| || ||||| |||| | || ||||| | || || ||| | || || | ||
Sbjct 34233027 CAGACATGTCGCATTTATGGTTCCCAGGGGGTA--CTCCAGGGACGTCTGGAATCCTTTG 34233084
Query 160331 TAGGGTGGCCCACAGGTGTTCGTCGGGGCTGTACGTGTCCTTAGACCATTCCATGAACTC 160390
| |||||||| ||| | || || ||||| || | ||| || | ||| ||| | |||||
Sbjct 34233085 AATGGTGGCCCGCAGATACTCATCCGGGCTATAGGCGTCTTTTGCCCACTCCCTAAACTC 34233144
Query 160391 TCCGA-----TTAACCTGTCCCGCAGAACGTGAGTAACGTAGGATCTGGTCACGACAAAG 160445
| || || || || || || | | |||||| || | || |||||
Sbjct 34233145 -CAGAATTTTTTTCACTTTCT---AGTACATAACCCACGTAGTTCCTACTGACCACAAAA 34233200
Query 160446 TACGCGCTGCCGGAGAATATCGGTATGGGTATAGGCGGCGTGT-CTTTGTCCTGACCGGT 160504
|| || ||||| || || || ||| | ||| || ||| |||||| || |||||
Sbjct 34233201 TAGGCACTGCCAGAAAAAATGGGTGTTTCGTGAGGAGGA-TGTACTTTGTT-TGCCCGGT 34233258
Query 160505 GTTAGACACCACTCCTTTCACCAGCGCGTGTCGCTTCTTCCACCTGACCATCTTGTGCGG 160564
||| | | | || || | | | ||||| ||||||| || || || |
Sbjct 34233259 GTTTGTAAAAGCCCCATTAATAACTTCAGAGCGCTTTGTCCACCTTTCCTCTTTATGTGC 34233318
Query 160565 TGGCATGCGTTCCGTCTCTAGACTGTTGGCACCGTCGAGCGATTTCAGCTGCTTGACGAT 160624
|||||| || || || || ||||| |||| | |||| |||| | |||| ||
Sbjct 34233319 TGGCATTTTCTCAGTTTCGAGGCTGTTTTCACCCATTAATAATTTGAGCTTCCTGACAAT 34233378
Query 160625 CTCTAGGTTCGTCTTGAGCGGAAAGTCGGTACCGCACAAGTTTATCACGTACTTCCATTT 160684
||| ||||| || || | || || || |||| || | |||||| || |||||| |
Sbjct 34233379 CTCCAGGTTGGTTTTAATAGGGAAATCCATACCACAAAGAATTATCAAGTGCTTCCAGTC 34233438
Query 160685 CGCGCTCAGGTCGTGCAGGTCCCTCATGCAATTAATATCTGCCTGCACGCGGCTCCAGG- 160743
|| |||| | || | ||| ||||||| |||| || ||||| || | ||||||
Sbjct 34233439 TGCACTCATTTTGTAGACATCCTTCATGCAGTTAAGGTCGGCCTGGACTCAGCTCCACAT 34233498
Query 160744 AAGCGTACACTACGTTCTCTAGTTTACTGGCCACAAAGACGTTATCGAAACACGACACGA 160803
|||| || || || |||| || | |||||||||||||| ||| ||| || || | |
Sbjct 34233499 AAGCATAGACAACAGTCTCCAGCTGGCTGGCCACAAAGACATTACTGAAGCAGGATGCAA 34233558
Query 160804 TTCCCACCAC 160813
| |||| |||
Sbjct 34233559 TGCCCATCAC 34233568
>seq84
Length=13838502
Score = 98.7 bits (108), Expect = 1e-15
Identities = 168/244 (69%), Gaps = 0/244 (0%)
Strand=Plus/Plus
Query 176182 TCCATTGAAAGTATGTGTTGTAGATTGTGTTGTTTGTATCTAGTATATGTAGATATTTTA 176241
|||| | |||||| | ||| | | | |||||| | || | | | |||||| ||
Sbjct 10615089 TCCAGTTAAAGTAACTAAGGTATAATTTATTGTTTCTGTCAACTTCCTTTAGATACCTTG 10615148
Query 176242 CTAGGTCACGTGGCGAGTCATAATCATTAACATGTATAAATGCGTGTGGTGGAATGTAGT 176301
|||| |||| || |||| |||||| | ||||| || |||| | || |||||| || |
Sbjct 10615149 CTAGCTCACTGGGAGAGTTATAATCTTCTACATGAATGAATGAATCTGCTGGAATATAAT 10615208
Query 176302 TTTCATAATTTTGTCTGGAGGGTCCTAAAACTATTGGTACGGTACGTGCTAATAATGAGC 176361
| ||||| |||| || || ||||| || || | ||||| | | || | || |
Sbjct 10615209 TCTCATAGTTTTCCCTAGATGGTCCCAACACAACAGGTACAGAGCCAGCCAGGAAAGCAT 10615268
Query 176362 GGTAGATCTTTTCTGAGATGTAGTCAGTGTGAATTGAGTTTTCAAAAGCTAAATAGAACT 176421
||||| |||||| | |||||| || |||| |||||||||||||| | | ||| || |
Sbjct 10615269 TGTAGAGCTTTTCGGTGATGTAATCTTTGTGGATTGAGTTTTCAAAGGAAAGATAAAATT 10615328
Query 176422 TACA 176425
| ||
Sbjct 10615329 TGCA 10615332
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 577071287580000
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