Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq54 91.5 4e-13 >seq54 Length=18522067 Score = 91.5 bits (100), Expect = 4e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666 |||||| || || || ||||| || ||||| || || ||||||| ||||| ||||| Sbjct 9163781 ACCAGTCTCAGCAGTCTTGACAGCAGTGTCAATGAGCCCCTCACGACCTCCCATGGCATG 9163722 Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726 |||||| | |||| ||| || || | | | | ||| | || || || ||||| Sbjct 9163721 GAAGAAAAACTCTGTAGGTGTCAGGCCGGCCAGATAAGAGTTTTCCACAAAGCCACGGCT 9163662 Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786 ||| ||| || ||| |||| | ||||| ||||| |||| || || | | || | || Sbjct 9163661 CTCAGGCCCATAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTAAACCCAAACGG 9163602 Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816 || ||||| || || || |||||||| || Sbjct 9163601 AATCCGCTTGCCCTCCACATTCTGCTGCCC 9163572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471431017908500