Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19]
20,500 sequences; 4,210,110,458 total letters
Query= NC_021901.1
Length=197693
Score E
Sequences producing significant alignments: (Bits) Value
seq296 84.2 3e-11
seq66 84.2 3e-11
seq109 82.4 1e-10
>seq296
Length=3301199
Score = 84.2 bits (92), Expect = 3e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 172519 GAAAAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAAT 172578
|| ||||||| |||||||||||| |||||| ||||| ||||| ||| ||||| |||
Sbjct 2027157 GAGAAGAAGGAGATTTAGGCCCAGTTTATGTTTTTCAGTGGAGGCATTTTGGGGCAGAAT 2027216
Query 172579 ATATCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAA 172622
||| || || ||||||| |||| |||||||||||||||
Sbjct 2027217 ATAAAGAGATGCATTCAGATTATTCAGGCCAAGGAGTGGACCAA 2027260
>seq66
Length=17239560
Score = 84.2 bits (92), Expect = 3e-11
Identities = 116/157 (74%), Gaps = 4/157 (3%)
Strand=Plus/Minus
Query 172467 TGGAATGATAATGGTTCTCGTGAATTTTTAGATT-TATGCGGGTTTACTGAAAGAAAAGA 172525
||| ||| ||||| ||||| || ||||| || | || || || ||| || ||||
Sbjct 10066304 TGGGATGCCAATGGGTCTCGAGACTTTTTGGACAGTCTG-GGATTCACTTCCCGAGAAGA 10066246
Query 172526 AGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATATCGA 172585
||| ||||| |||||| ||||||| ||||| ||||| ||| ||||| |||| | |
Sbjct 10066245 AGGAGATTTGGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATACAAAG- 10066187
Query 172586 CTGTG-ATACAGATTACACAGGACAAGGAGTGGACCA 172621
| || || ||||||| |||| ||||||||||||||
Sbjct 10066186 CGATGCATTCAGATTATTCAGGTCAAGGAGTGGACCA 10066150
>seq109
Length=11202510
Score = 82.4 bits (90), Expect = 1e-10
Identities = 78/100 (78%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 172522 AAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATA 172581
||||||| |||||||||||| ||||||| ||||| ||||| ||| ||||| ||||||
Sbjct 6651552 AAGAAGGAGATTTAGGCCCAGTTTATGGCTTTCAGTGGAGGCATTTTGGGGCAGAATATA 6651611
Query 172582 TCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCA 172621
|| || ||||||| |||| ||||||||||| ||
Sbjct 6651612 AAGAGATGCATTCAGATTATTCAGGTCAAGGAGTGGATCA 6651651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 632327524540000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |