Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chrysochloris_20asiatica_20[refseq_20GCF_5F000296735.1_202012-09-19] 20,500 sequences; 4,210,110,458 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq281 96.9 3e-15 seq143 89.7 4e-13 >seq281 Length=3633602 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || ||||| |||||| | || || ||||| |||||| | || ||||| Sbjct 126707 AATGCAGATCTTTGTGAAAACTCTCACGGGTAAAACTATTACCCTTGAGGTTGAGCCCAG 126648 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 || || | | | || || ||||| |||||||||||| | ||| || || Sbjct 126647 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 126588 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || ||| | || | ||| || ||||| ||||| |||| | | || || | |||||||| Sbjct 126587 GCAGAGATTGATCTTTGCTGGGAAACAACTGGAAGATGGCCGTACTCTGTCTGATTACAA 126528 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| || |||||||| || ||||| |||| | | ||| ||||||| Sbjct 126527 CATCCAGAAAGAATCCACCCTGCACCTGGTCCTTCGTCTGAGAGGGGG 126480 >seq143 Length=9160510 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || ||||| || || || || ||||||||| | ||| ||||| Sbjct 9114997 ATGCAGATCTTCGTGAAAACCTTGACTGGTAAGACCATTACCCTTGAAGTAGAGCCCAGT 9115056 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| |||||| |||||||||||| | || || || Sbjct 9115057 GACACCATTGAGAATGTCAAAGCAAAGATTCAAGACAAAGAAGGCATCCCTCCTGACCAG 9115116 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || ||| | || | ||| || ||||||||||| || | ||| || | || |||||| Sbjct 9115117 CAGAGATTGATCTTTGCTGGGAAACAGCTGGAAGACAAGCGCACACTGTCTGACTACAAC 9115176 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || || ||||||||||| ||||| |||| Sbjct 9115177 ATCCAGAAAGAATCTACCCTGCACTTGGT 9115205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412738454106500